Dyadobacter pollutisoli: ON006_16235
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Entry
ON006_16235 CDS
T09794
Name
(GenBank) RagB/SusD family nutrient uptake outer membrane protein
KO
K21572
starch-binding outer membrane protein, SusD/RagB family
Organism
dpf
Dyadobacter pollutisoli
Brite
KEGG Orthology (KO) [BR:
dpf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dpf02000
]
ON006_16235
Transporters [BR:
dpf02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
ON006_16235
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SusD_RagB
SusD-like_3
SusD-like_2
LPAM_1
Motif
Other DBs
NCBI-ProteinID:
WAC09301
UniProt:
A0A9E8SJ32
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All DBs
Position
3973699..3975432
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AA seq
577 aa
AA seq
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MMKKLIYIMLLAVGLTACDLDQLPKEAIAPETFFNTENDLLLYTNSFYNALPSAEDVYNE
DVDNVVKNSLRDELQGTRIVPTSGGGWTWTNLRNINYFLANSGKCTDKKAVAKYNGLARF
FRAYFYFGMVKRFGDVPWYSSTIEVEDQDLLTKARDPRTLVMDSVMADIDFAIANLDGTR
QVNTITKWTALALKSRMALYEGTYRKYHTEFNLPDSEKFLDECIEASQDLMKNSGYGIYK
DTPATAYLKLFSADNSIAEEVILGRDFSDQLQVYHNLNYYTMTASYGKPGLEKKLVNSYL
MADGTRFTDIKGYETMQFYDEVQKRDPRLTQSIRTPGYTRIGESTPLVPEFGATVTGYQL
IKFVSEPKWDTFGKDITDMPIFRYAEVLLNFAEAKAEKGTLTQDDLDISTKLIRDRVGMP
NINLADANAKPDPYQAQMYTKLSGKNAGVILEIRRERRVELVMENFFRWDDIIRWKEGQL
LTKQYKGMYFPGPGSYDLDRNGKVDLVIYEGTKPTVPGAQLLKLGSEILLENGVKGGNII
INGHITKKFDENKDYLYPIPKQERLLNTNLSQNPNWE
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atgatgaaaaagctcatatatatcatgctgctggctgttgggctcaccgcctgcgacctg
gaccagctacccaaggaagccattgcgccggaaacattttttaatacagaaaatgacctg
cttctttataccaattcattctacaacgccctgccgagtgcggaggatgtatataatgaa
gatgtggataatgtagtcaaaaacagcttgcgggatgaattgcagggaaccaggatcgtg
ccgacgagtggtggtggctggacctggaccaacttgcgtaatatcaattacttccttgcc
aattccggtaaatgcacagacaaaaaagcagttgcgaaatacaatggattagcacgtttc
ttccgggcttacttttacttcggaatggtgaaacgcttcggcgatgtgccctggtattct
tccacgatcgaagtggaagaccaggatctgctaaccaaggcaagagatccgagaacgctg
gtgatggactccgtaatggccgacattgacttcgcgatcgctaacctcgacggcacacgc
caggtgaatactattaccaaatggacggcactcgcattgaagtcgcgcatggcattgtac
gaaggtacctaccgcaagtatcacacggaatttaaccttcccgactctgaaaaattcttg
gatgaatgcattgaagcttcacaagacctgatgaaaaacagtggctacggcatctacaaa
gacactccggcaactgcgtatctcaaactgttctctgccgataattccatcgccgaggaa
gtcattctcggtcgcgatttcagcgatcagttgcaggtttatcacaacctcaactattac
acaatgacggcttcgtatggcaagccgggacttgaaaaaaagctggtgaacagctatttg
atggccgatggaacgcgttttacggatatcaaaggttacgaaacgatgcagttttacgac
gaggtccagaaacgtgacccacgcctgacgcagtctatccgcacaccaggctacacccgc
attggcgagtcgacaccattggtaccagagtttggcgctacggtgacgggttatcagctg
atcaaattcgtttccgagcctaagtgggatacattcggaaaggacattaccgacatgcca
atcttccgatatgcggaggtgttgctgaacttcgcagaagcaaaagcggaaaaaggcaca
ttgacacaggacgatcttgacatttcgaccaaactgatccgtgaccgtgtgggaatgccc
aacattaacctggccgacgccaatgcgaagccggacccgtaccaggcacagatgtacacg
aaattgtccggcaaaaatgcaggtgtgatccttgaaatccgcagagaaagacgtgtggaa
ctggtgatggaaaacttcttccgctgggacgacattatccgctggaaagaaggccagctc
ctgaccaaacagtacaaaggaatgtacttcccaggtcccggcagctatgatctggacagg
aatggtaaggttgacctcgtgatttacgaaggcaccaaaccgacggttcccggtgcgcaa
ctattaaaattgggcagcgaaattctcctcgaaaatggcgtcaaaggcggaaatattatc
attaacggacacattaccaagaagtttgacgaaaacaaagactacctataccctattcca
aagcaagaaaggttattgaacaccaatctttcgcagaacccgaattgggagtaa
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