Dyadobacter pollutisoli: ON006_18650
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Entry
ON006_18650 CDS
T09794
Name
(GenBank) bifunctional UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine ligase/alanine racemase
KO
K01798
Alr-MurF fusion protein [EC:
5.1.1.1
6.3.2.10
]
Organism
dpf
Dyadobacter pollutisoli
Pathway
dpf00300
Lysine biosynthesis
dpf00470
D-Amino acid metabolism
dpf00550
Peptidoglycan biosynthesis
dpf01100
Metabolic pathways
dpf01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
dpf00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
ON006_18650
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
ON006_18650
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
ON006_18650
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
ON006_18650
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
dpf01011
]
ON006_18650
Enzymes [BR:
dpf01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.1 alanine racemase
ON006_18650
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.10 UDP-N-acetylmuramoyl-tripeptide---D-alanyl-D-alanine ligase
ON006_18650
Peptidoglycan biosynthesis and degradation proteins [BR:
dpf01011
]
Precursor biosynthesis
Amino acid ligase
ON006_18650
Racemase
ON006_18650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ala_racemase_N
Ala_racemase_C
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
WAC09770
UniProt:
A0A9E8N4T9
LinkDB
All DBs
Position
4543686..4546160
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AA seq
824 aa
AA seq
DB search
MSLTGNNAQGITTKAAYILTDSRQVSFPEQSIFFAIKGVRHDGHQFVPELYESGVREFVV
EEASFSEALRTLTSQWDDAQIWVVPSAIRALQKLVSEKRRQFDIPVVGIAGSNGKTIVKE
WLVQLTAPGKRVVASPKSYNSQIGVPLSVWNLSKEHNLGIFEAGISQAHEMEHLQPVMQP
SIGIFTNIGPAHDDGFRSRKQKITEKLRLFTKVRKLIYRKDYKDIDEEVSLILRPVNPFL
EVISWGSGHSGASIQVVYDLQKDKTFIDFKGKFGEHTFETSFRDDASLENLTHCIVFLLD
FGLSHSTIQERIFHLKPVSMRLELKEGINHCYIIDDAYNNDVQGLSMALNFLGQQEQRQK
KTVILSDVLQTGQTPAELYGLVAKLLKEKAIDEVIGIGPEISSQAGLFELPNQHFFPDTD
TFLSDFPFNTLSDSLVLVKGARPFSFEKIVHRLQQKAHGTVLEINLDALAHNLNYYRSKV
GSGTKIMAMVKAFAYGSGSSEVASLLQYHRVDYLGVAYADEGVALRQYGINLPCMVMNAT
VPAFDLLIQYKLEPEIYSRRILLDWINYIKKINDPSEIPSVHLKLDTGMHRLGFVKDDYE
WLIGQLQSHPAVKVASIFSHLVGADEGVHNEFSKHQYQQFEEGAALLEDALGYKTIKHIL
NSAGIVRFPDYKLDMVRLGIGLYGVEATGQEQRALQSVGTLKTIISQIKYLSSGETVGYS
RKGHIEHDSAIATLAIGYADGYDRGLGNGTGQVLVNGTLCPTIGNICMDMTMIDVTSARA
EEGDEVIVFGKEVPITELAKSINTIPYELLTGIGDRVKRVFYKE
NT seq
2475 nt
NT seq
+upstream
nt +downstream
nt
atgagccttaccggaaataacgcacagggaataactacaaaagctgcttacattttaacc
gacagccgccaggtttcctttcctgaacaaagtatattttttgccatcaaaggagtaaga
cacgatggccaccagtttgttcccgagttatacgaaagcggtgtcagggagtttgtagtg
gaggaagcatccttctccgaagcacttcgtacactcacttcacaatgggacgacgcccaa
atatgggtggttccgtccgcaatccgtgcattacaaaagctagtctcagaaaaacggcgc
cagtttgatattccggtggttggtattgccggaagtaatggaaaaacgatcgtaaaagaa
tggctcgtacaactcactgctcctggaaaaagggtcgtagctagcccgaaaagctataat
tcacagataggagttccgctctccgtctggaacctgagtaaggaacataacttggggatt
tttgaagcaggtatctcccaggctcatgaaatggagcatctgcaaccggtcatgcagcct
agtatcggcatatttaccaatattggcccggcacatgatgatggtttccgcagtcgcaag
caaaagatcaccgagaagctgcgtttatttaccaaggtcagaaaactcatttatagaaaa
gactacaaagacattgacgaagaggtcagtctgatccttcggccggtgaatccgtttctg
gaagtgatcagctggggtagcggccattcaggagcatccattcaagttgtttacgacctt
caaaaagataaaacgtttatcgatttcaaaggtaaattcggcgagcatacatttgaaacg
tcgtttcgggatgatgcttcgctggaaaaccttacccactgcattgtatttctgctcgat
ttcggactttctcacagcaccattcaggaaaggatttttcacctgaaaccagtgtccatg
agattggaactgaaagaagggatcaaccattgctatatcatcgacgatgcctataacaat
gatgttcagggactttcgatggcccttaactttctggggcaacaggaacagcgtcaaaag
aagacagtaatactttcggacgtactgcaaacaggacaaactcccgctgagctttacggg
ctggtcgctaaattgctaaaagaaaaagcgatcgatgaagtcattgggataggcccggaa
ataagcagccaggctggattgttcgagcttcctaatcagcatttcttcccggatacggac
acatttttaagtgattttcctttcaatacattgtcagacagcctggtactggtaaaaggc
gcgagaccattttcttttgaaaaaatcgtccaccggttgcagcaaaaagcacacggcaca
gtcctggaaatcaacctggacgccttggcgcataatctgaactactaccggtccaaagta
ggctccggcacgaagatcatggccatggtaaaagcatttgcatatggcagtggcagctcg
gaagtggcgtcattgctgcaataccaccgcgtcgactacctgggtgtggcttatgcggac
gaaggcgtggcactccgccaatatggtatcaatctgccttgtatggtcatgaatgctaca
gttcctgcatttgacctgctcattcagtacaaacttgaaccggaaatttacagtcgtcgc
atcttgctggattggatcaattacattaaaaaaatcaatgacccgtccgaaatcccatct
gtgcatttaaaacttgataccggaatgcaccgcctgggttttgtgaaggatgattatgaa
tggctgatcgggcagttgcagagtcacccggccgtgaaagtcgccagtattttttcccat
ttggttggcgctgatgaaggtgttcacaacgaattttcaaaacatcagtaccagcaattt
gaggaaggtgccgcgctgctggaagatgctttgggctacaaaacgatcaaacacattctg
aattcagccggaattgtacgtttccccgactataagctggatatggtaaggctcgggatc
gggctctacggtgtcgaagcgaccgggcaggagcaacgtgcgttgcagtcggtgggcaca
ttgaaaaccattatctcgcagatcaaatatctttcgtcgggcgaaaccgtgggatacagc
cgaaaaggccacattgagcacgattcagcgattgcgaccctggcgattggctatgccgac
ggttacgatcgcgggcttggcaacggtaccggacaggtgctggtgaacggaacattgtgc
cctaccatcgggaatatttgtatggatatgaccatgatcgatgtgaccagtgcccgggca
gaagaaggggacgaagttattgttttcggcaaagaagtacccattactgagctagccaaa
agcattaacaccatcccctatgagttgctgaccggcatcggtgaccgggtcaaacgagtt
ttttataaggagtaa
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