KEGG   Dyadobacter pollutisoli: ON006_23690
Entry
ON006_23690       CDS       T09794                                 
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
  KO
K03654  ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
Organism
dpf  Dyadobacter pollutisoli
Pathway
dpf03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:dpf00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    ON006_23690 (recQ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dpf03019]
    ON006_23690 (recQ)
   03400 DNA repair and recombination proteins [BR:dpf03400]
    ON006_23690 (recQ)
Enzymes [BR:dpf01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     ON006_23690 (recQ)
Messenger RNA biogenesis [BR:dpf03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     ON006_23690 (recQ)
DNA repair and recombination proteins [BR:dpf03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      ON006_23690 (recQ)
SSDB
Motif
Pfam: DEAD RecQ-1-like_HTH RQC Helicase_C HRDC RecQ_Zn_bind ResIII HTH_40 ESCRT-II
Other DBs
NCBI-ProteinID: WAC10733
UniProt: A0A9E8N7E0
LinkDB
Position
5776644..5778857
AA seq 737 aa
MVKQVDTVVLDTLKERLKEIFGYSQFRGEQEVIIQNILLGKNTFVIMPTGAGKSLCYQLP
ALVSDGLTIVISPLIALMKNQVDQLTAFGINAQFLNSTLTKAEMTRVKTDALDGSLKLLY
IAPESLTKEDNLDFLKKVKISFVAIDEAHCISEWGHDFRPEYRRIYGIIENIGRLPIIAL
TATATPKVQQDIRKNLQMEEAETFKSSFNRKNLYYEIRPKKDVKKQLIRYVRNNKGKSGI
VYCLSRKTVEEVAELLTVNDVRALPYHAGLDSNTRMANQDAFLNEEADVIVATIAFGMGI
DKPDVRFVIHYDVPKSLEGYYQETGRAGRDGLEGNCLMFYSYDDIQKLEKFNKDKTVTER
DNARHLLNEMVAYSTLGVCRRRQLLSYFGEYLEKDCGFCDNCVKHTEKIKVQDDVILVLR
TVQLTEQRFDADHIADVLTATENQYVKSYEHDQLDVYGKGTELNESRDYWVSAIRQLVIF
NYLEKDIENYGIIKLGEKGANYLNDPYPVTLHKDHNFDEEEIKPEDEDKDSANGNGSAHA
YDEALLGMLKALRKKVAKEKNLPPYVIFQDPSMEEMATTYPTTQQEMAQINGVGMGKVQK
FGRQFIDLITRYVEENEIETAKDVVIKSTVNKSKIKIFIIQQVDRKVSLDEIAEVKDLAL
ADVIEEVEHICYSGTKLNLDYYINQVIDRERQQDIYDYFMTAETDNIAAALDEFSNDEIS
EEELRLMRIKFLSELAN
NT seq 2214 nt   +upstreamnt  +downstreamnt
atggtaaagcaggtagatacagtcgtattagacacgttaaaagaaagacttaaagaaata
tttgggtatagtcaattccggggtgaacaagaagtaatcattcagaacatccttcttggt
aaaaatacttttgtgatcatgccaaccggcgctggcaagtcgctttgctaccagttgcct
gcccttgtcagtgacggccttacgattgtgatttccccgcttatcgccttgatgaagaat
caggtcgaccagttaactgctttcggtatcaacgcccagttcctcaactctacacttacc
aaagccgaaatgacccgcgtcaagaccgacgctctggacggtagccttaaactactctac
attgcaccggaatcgcttactaaagaggacaatctggattttcttaaaaaggtaaaaata
tcttttgttgccattgacgaagcgcactgtatctccgaatggggccatgatttcagaccg
gaataccgccggatttatgggattattgagaatataggacggcttcctattatcgctctt
actgccactgctactcccaaagttcagcaggatatccgcaagaacctgcaaatggaagag
gccgagacattcaaatcctcttttaacagaaaaaacctttactacgagatccgtccgaaa
aaggatgtcaaaaaacagctgatccgctatgtgcgaaacaataaaggcaagtccggaatt
gtgtattgcctgagcagaaaaacggttgaagaagtagcggagttgctgactgtgaatgat
gtgcgagcattaccataccacgcaggtctcgacagcaatacgcggatggctaatcaggat
gctttcctgaatgaagaggctgatgtgatcgtggcaaccattgcttttggaatgggcatc
gataagccggatgtgaggtttgtaatacattacgacgtccccaaatcgctggaaggctat
taccaggaaaccggccgggcaggtcgtgacggactggaaggaaactgcctgatgttttac
agctacgacgacattcaaaagctggaaaaattcaataaggacaaaaccgttaccgaacgc
gacaatgcgcgtcacctattgaatgaaatggtggcctactctaccctgggcgtttgccgc
aggagacagctactgagctatttcggtgagtacctggaaaaggattgcggcttttgcgat
aactgtgtcaaacacacagaaaaaatcaaagtgcaggatgacgttatcctagtgctgcgc
accgtacaacttaccgaacaacgttttgatgccgaccacattgccgacgtcctgactgcc
actgaaaaccagtatgtgaagagctacgagcatgaccagctggacgtttatggcaaaggt
accgaactgaatgagtcgcgtgattactgggtttcggctatccgtcagttggtgattttt
aactatcttgaaaaagacattgaaaattacggaatcatcaaactgggagaaaaaggagcc
aattacctgaacgacccttacccggttacccttcataaggatcataatttcgacgaggag
gagatcaaaccggaagatgaggacaaggactcggccaatggaaacggaagcgcacatgct
tacgatgaggccttgctcgggatgctcaaagcgcttcgcaaaaaggtagcgaaagaaaaa
aatctgcctccctatgttatcttccaggatccttccatggaggaaatggctacgacttat
cctactacccagcaggaaatggcacagatcaatggtgtcggaatgggtaaggtgcagaag
tttggccgccagtttatcgatctgatcacgcgctatgtggaggagaacgagatcgaaact
gccaaagatgtggtgatcaaatccacagttaataaatcaaaaattaaaatcttcatcatt
cagcaggttgaccgcaaggtgagcctggacgaaatcgccgaggtcaaagatctggcactt
gcggacgtcattgaagaagtggagcacatttgctattccggaaccaagcttaacctcgat
tattatatcaatcaggtgatcgaccgggaaagacaacaggatatttacgactacttcatg
actgctgaaaccgacaatatcgcagcagcattggatgagttttcgaatgatgaaatcagt
gaagaagaattgcgtctgatgcgtatcaagtttttatccgaactggctaactaa

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