Dyadobacter pollutisoli: ON006_24990
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Entry
ON006_24990 CDS
T09794
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
dpf
Dyadobacter pollutisoli
Pathway
dpf03420
Nucleotide excision repair
dpf03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dpf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ON006_24990
03430 Mismatch repair
ON006_24990
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dpf03400
]
ON006_24990
Enzymes [BR:
dpf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ON006_24990
DNA repair and recombination proteins [BR:
dpf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ON006_24990
MMR (mismatch excision repair)
Other MMR factors
ON006_24990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
PcrA_UvrD_tudor
AAA_30
CrAss_Ring_3_4
ResIII
Motif
Other DBs
NCBI-ProteinID:
WAC10990
UniProt:
A0A9E8N6Z5
LinkDB
All DBs
Position
complement(6079555..6081849)
Genome browser
AA seq
764 aa
AA seq
DB search
MSKLDKHTILNRNDYLSTLNEPQRAAVLHGEGPLMIIAGAGSGKTRVLTFRIANLIENGV
DPFRILSLTFTNKASGEMRQRIEGAVGTEARNIWMGTFHSVFAKILRIEARYLGYTSDFS
IYDTDDSKSLLRSIIKEYNLDDKVYKANVVFNRISGAKNRLISAEDYANNAVIQADDEAA
KMKEIGRLYKTYAARCFQANAMDFDDLLFNTNILFRDFPDVLYKYQHKFQHVMVDEFQDT
NVSQYLITRKLSAVHRNIVVVGDDAQSIYAFRGANIENILNFEKDFPDVVTIKLEQNYRS
TSNIVNAANSVIARNKSQLKKETFTVNEEGSLIDVIKAGSDNEEGRLVATAIFEEKMQKA
LRNENFAILYRTNAQSRSFEEALRKLGIKYRIIGGQSFYQRKEIKDLLAYLRFTVNQRDE
EAFKRIINLPKRGIGDATVAKIAVTASENNIAIWDVVANIGNYASGRTISPIEQFGTLIK
SFKILVSEGKDAYEISAHIAKASGILRELYEDKTVEGLSRYENVQELLNGIKEFVDNEET
EDKTLSAFLQSVSLLTNADEPDDNNDNDRVTMMTIHSAKGLEFRNVFIVGLEEDLFPSQM
MLESRQDLEEERRLFYVAITRAEKKLSFSYAESRYQWGRLKMCEPSRFLLEVDQRYLNVS
KMISVAAERENAPSASPFSARNLIQRKPTEPKPSPAAASYVPSADFVPSDTSDLIEGNKV
EHLKFGLGVVTKMDINGTDRKATVKFDLVGEKTLLLSFAKLRIL
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaattggataaacatacaattttgaatcgtaacgattatttgtcaaccctgaat
gagcctcagcgcgcagcagtactgcatggcgaaggcccgttgatgatcattgcaggtgcg
ggttcggggaaaacaagggttttgacattccgcattgctaacctgattgagaatggtgtg
gacccgttccggattttgtccctaacttttactaataaagcgtcgggtgaaatgcgtcaa
cggatcgagggtgcggtaggaacagaggcgcggaatatctggatggggacttttcactcg
gtatttgcaaaaatattacggattgaagcgaggtacctgggctacaccagtgatttttct
atttatgataccgacgattctaagtctttattgagaagcatcattaaggaatataacctc
gatgataaggtatataaagccaatgtagtttttaaccgcatatccggggctaaaaacagg
cttatttcggcggaagactatgcgaacaatgcagtaatccaggctgatgatgaagcggcg
aaaatgaaagagatcggaaggctatataaaacgtatgccgccaggtgctttcaagccaat
gccatggactttgatgacctgctgtttaataccaatatccttttccgcgattttccggat
gtactatataagtaccagcacaagtttcaacatgtgatggtcgatgagtttcaggatacc
aacgtttcgcaatacctgattacccgcaaactttcagcggttcaccgtaatatagttgtg
gtaggtgatgatgcccaaagtatttatgctttccgtggtgctaacattgagaatatcctg
aatttcgaaaaggacttcccggatgtggtcacgatcaaactggaacaaaactaccgttcg
accagcaacattgttaatgctgccaactctgtcattgcccgcaacaaatctcagcttaaa
aaggaaacctttacagttaatgaagaaggttccttaatagatgtcatcaaagcagggtct
gacaacgaagaaggacggctggtagcgacggcaatttttgaggaaaaaatgcagaaagca
ctgcggaatgagaattttgccattctgtaccgtaccaatgcgcagtctaggtctttcgaa
gaagccttgcgcaagctggggattaagtaccggatcatcggtggccagtcattttaccaa
agaaaagaaatcaaggacctgcttgcttatttacgttttacggtcaaccaacgcgacgaa
gaagcattcaaacggatcattaacctgcccaaaagagggattggtgatgccaccgtagcc
aaaatagcagttaccgcttccgaaaataatattgcgatctgggatgtggtggccaacatt
ggtaactacgcaagcggcaggacgatctctcctatcgaacaatttgggacgctgatcaaa
agcttcaagattttggtaagtgaaggaaaagacgcttatgagatctctgcacacattgca
aaggcctccggtatcctgcgagaattgtatgaggacaaaactgtggaaggattatcgcgc
tacgaaaacgtacaggagttgctgaacgggattaaggaatttgtcgacaatgaagaaacc
gaagacaaaaccctgagcgcttttctccagtcggtgtcattgttgaccaatgcagacgag
ccggatgataataatgacaatgaccgcgtgaccatgatgaccattcactctgcaaaaggt
cttgaattcagaaacgtgtttattgtagggcttgaagaagacctttttccaagccagatg
atgctggaaagccggcaggatctggaagaagagagacgcttgttttatgtagcgatcact
cgtgctgaaaagaagctgtccttttcgtatgctgaaagccgatatcaatggggccggttg
aaaatgtgtgagccaagtcggttcctgctggaagtagatcagcgttaccttaatgtctct
aaaatgatttcggttgcggcggaacgtgaaaacgctccttcggcaagccctttttctgca
agaaacctgatccaacgtaaaccaacggagccaaaacccagcccggccgcagcttcgtat
gtaccttctgccgacttcgtgccgagcgatacttctgatttgatagaaggaaataaggtg
gagcacctgaaatttgggcttggggtagtgaccaaaatggatataaacggaaccgaccgc
aaggcaacagtcaaatttgacctggttggggaaaaaacattattgctgagttttgcgaaa
ctgaggatactttaa
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