Dyadobacter pollutisoli: ON006_25550
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Entry
ON006_25550 CDS
T09794
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
dpf
Dyadobacter pollutisoli
Pathway
dpf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dpf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ON006_25550 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dpf03019
]
ON006_25550 (recQ)
03400 DNA repair and recombination proteins [BR:
dpf03400
]
ON006_25550 (recQ)
Enzymes [BR:
dpf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ON006_25550 (recQ)
Messenger RNA biogenesis [BR:
dpf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ON006_25550 (recQ)
DNA repair and recombination proteins [BR:
dpf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ON006_25550 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HTH_40
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
HTH_11
zf-CXXC
Cas3-like_C_2
TM1506
HEM4
TrkA_N
Motif
Other DBs
NCBI-ProteinID:
WAC11087
UniProt:
A0A9E8SNS6
LinkDB
All DBs
Position
complement(6200238..6202385)
Genome browser
AA seq
715 aa
AA seq
DB search
MSDNKLDALKRYFGYDSFRPQQSQIIDTVMENRDCLVLMPTGGGKSVCFQIPAILRQGLT
VVISPLIALMKDQVEALRGNGVNAAFLNSTLSSAEQDQVMWQAKVGELKLLYIAPERLFS
GNTFEFLREWNVCLFAIDESHCISSWGHDFRPEYRQLTNLKLRFPDVPIIALTATADRVT
RRDILKQLNIEHAETFIASFDRPNLNLSVLPGRKRLQQIQSFINKHDGQAGIIYCLSRKG
TETVAASLRNAGFKAEFYHAGLAADKRSKVQEQFLRDDIQVIVATIAFGMGIDKSNVRWV
IHYNLPSNVESFYQEIGRAGRDGSPSDTVLFYSYMDIITRQDMINNSDQSAEQKELLHAK
LNRMKQYAEADICRRRILLSYFNEAVEKDCGNCDVCRNPRTRFDATIIAQKALSGIARTD
QKIAMGMLIDILRGSRNRNVLQHGYERLPTFGVGIELRGEEWAEYISQLLNSGVMDIAYD
EGHSFKLNPVSRQILKGERKVELVKFIPISERKAKEEELVPKEKPKQEIIRDALFERLRI
LRKQMADALGVPPYVVFSDATLSEMAQKKPVSEAQMKAVSGIGAEKFRRYGETFINEILS
FAKENTKPGTRVIKGMTYIETLDLYKEGYLLNDIAQKRDLSTVTIISHLVKLKEDGHDID
LKGLIDKKAYQTIIQAAQEIQTSKNDPLKPLFELLNEQFDYGQIRLALAIWEEER
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgtcagacaacaaactagacgcactaaaaagatatttcggttacgactcctttcgccca
cagcagtctcagatcatcgatactgtgatggaaaaccgggattgccttgtactaatgcct
accggcggaggaaaatccgtctgttttcagatcccggctatcctccgccagggactgacg
gtagtcatttctccgttgatcgcattaatgaaagaccaggtggaagcgctgcgcggtaat
ggtgtcaacgcggcgtttctgaattccacattgtcttctgcggagcaggatcaggtcatg
tggcaggcgaaagttggtgaactaaaattgctctacattgcccccgagaggcttttttca
ggaaatacatttgaatttctgcgcgaatggaatgtctgtcttttcgcgatagacgagtcg
cattgtatttcatcctgggggcacgattttcgcccggagtaccggcagctgaccaacctg
aaactacgctttcccgatgtgccgatcatcgcgctcactgctactgccgaccgggttacg
cgcagagatattttgaaacagcttaatatagagcacgccgaaacattcattgcaagtttt
gatcgccctaacctcaatctgagtgtgttaccaggccggaaacggttgcagcagatccag
agctttatcaataaacacgatgggcaagccggtattatctactgcctgagccgtaaaggc
acagaaaccgtagcagccagtctccggaatgcgggtttcaaagcagaattttaccatgca
ggacttgccgctgacaaacgttcgaaggtccaggagcagtttctgagagacgacattcag
gtgatcgtggctaccattgcttttggaatgggtattgataaatccaatgtgcgctgggtg
atccactacaacctgccttccaatgttgagagcttttaccaggaaataggaagggcaggc
cgcgacggttcaccgtcagataccgttttgttttacagctacatggacatcattacccgc
caggatatgatcaataattccgatcagtcggccgagcaaaaggagttgctgcacgcaaag
ctgaaccgtatgaaacagtatgcggaggcagatatttgccgcaggcggattttactgagt
tattttaatgaagcggtcgaaaaagattgcggaaactgcgatgtgtgccggaacccgagg
acccgttttgatgctaccatcattgcccaaaaagcattgtcaggtatagcccgcaccgat
caaaaaatagcgatggggatgctcattgacattttgcggggcagccgcaaccgaaatgta
ctgcaacatggctacgaacgtctgcctacatttggtgtcggtatcgagctgcggggtgaa
gagtgggcggaatacattagccagcttttgaattccggtgtcatggatatcgcttatgac
gaaggacattcttttaaactcaatccggtcagcaggcaaattttgaaaggtgagcgaaaa
gtagaactcgtgaagttcatcccgatcagcgagcgtaaagcgaaagaagaggagctggta
cccaaggaaaagccaaagcaagagattattcgcgatgccctatttgagagactgagaata
ctaaggaagcaaatggcagatgcgcttggcgtcccaccatatgtcgttttcagtgatgca
acattgtccgaaatggcacagaaaaaacctgtttccgaggcgcaaatgaaagcggtttcg
gggattggagccgagaaattcagacgatacggggaaacatttatcaatgaaatcctgtcg
ttcgcgaaggaaaatacaaaaccaggaacgagggtcatcaagggaatgacatacatcgaa
acgctggatctgtacaaagaaggctatttactgaatgacattgcccaaaaaagagatctc
agtaccgttaccatcatctcgcatttggtcaaattaaaagaggacggacacgatatcgat
ctaaaaggattgattgacaaaaaagcctaccagaccatcattcaggcagcgcaggagatc
cagacaagtaaaaacgatccattgaaaccactgtttgagcttctcaacgagcagttcgac
tatggacagatcaggctggcgctggcaatttgggaagaagagcggtga
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