KEGG   Dyadobacter pollutisoli: ON006_26160
Entry
ON006_26160       CDS       T09794                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
dpf  Dyadobacter pollutisoli
Pathway
dpf00010  Glycolysis / Gluconeogenesis
dpf00020  Citrate cycle (TCA cycle)
dpf00260  Glycine, serine and threonine metabolism
dpf00280  Valine, leucine and isoleucine degradation
dpf00310  Lysine degradation
dpf00380  Tryptophan metabolism
dpf00620  Pyruvate metabolism
dpf00630  Glyoxylate and dicarboxylate metabolism
dpf00640  Propanoate metabolism
dpf00670  One carbon pool by folate
dpf00785  Lipoic acid metabolism
dpf01100  Metabolic pathways
dpf01110  Biosynthesis of secondary metabolites
dpf01120  Microbial metabolism in diverse environments
dpf01200  Carbon metabolism
dpf01210  2-Oxocarboxylic acid metabolism
dpf01240  Biosynthesis of cofactors
Module
dpf_M00009  Citrate cycle (TCA cycle, Krebs cycle)
dpf_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
dpf_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
dpf_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:dpf00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    ON006_26160 (lpdA)
   00020 Citrate cycle (TCA cycle)
    ON006_26160 (lpdA)
   00620 Pyruvate metabolism
    ON006_26160 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    ON006_26160 (lpdA)
   00640 Propanoate metabolism
    ON006_26160 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    ON006_26160 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    ON006_26160 (lpdA)
   00310 Lysine degradation
    ON006_26160 (lpdA)
   00380 Tryptophan metabolism
    ON006_26160 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    ON006_26160 (lpdA)
   00670 One carbon pool by folate
    ON006_26160 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:dpf04147]
    ON006_26160 (lpdA)
Enzymes [BR:dpf01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     ON006_26160 (lpdA)
Exosome [BR:dpf04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   ON006_26160 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 FAD_binding_2 DAO GIDA FAD_oxidored NAD_binding_8 HI0933_like 3HCDH_N Thi4 AlaDh_PNT_C FAD_binding_3 Lys_Orn_oxgnase 2-Hacid_dh_C DUF7395 Lycopene_cycl UDPG_MGDP_dh_N
Other DBs
NCBI-ProteinID: WAC11206
UniProt: A0A9E8SKX5
LinkDB
Position
6334433..6335830
AA seq 465 aa
MAQTYDVIVIGSGPGGYPAAIRASQLGLKVAIVEKESLGGICLNWGCIPTKALLKSAQVF
EYIKHAKDYGINVSDSSADFGAVIKRSRGVADTMSKGVSFLMKKNKIDVIMGTGKVKGQK
TVAVTDKDGKTTDYTAAKGVIIATGARARELPNIKIDGQKVIEYRKAMSLEKQPASMLVV
GSGAIGMEFAYVYASMGTKVTVVEFLPNLVPVEDEDISKEIAKQYKKLGIDTYVNSTVET
VDVSGNGCKVSVKTPDGQKSFEVDIVLSAAGIVSNLENIGLEETGIKTDKGKITVNEWYE
TSVPGFYAIGDCTPGPALAHVATAEGIICAEKIAGHKTEALDYGNIPGCTYCQPEIASVG
LTEKKAKEAGYDIKVGKFPFKASGKAVGAGVTDGFVKVIFDSKYGEFLGAHMIGANVTEM
IAEVVVARKLETTSHEIMRAIHPHPTMSEALKGATEAAYGEAIDL
NT seq 1398 nt   +upstreamnt  +downstreamnt
atggctcaaacatatgatgtgattgtaattggtagcggccccggaggttatcccgcagcc
attcgtgcttcccaattaggacttaaagttgcaattgttgaaaaagaaagtttaggagga
atttgccttaactggggttgtatccctaccaaagcacttctgaaaagtgcccaggttttt
gaatacattaagcatgcaaaagactatggtatcaatgtaagcgattcgtctgccgatttc
ggagcggttatcaaacgcagccgcggcgttgccgataccatgagcaaaggggtatcattt
ttgatgaagaagaataagatcgacgtcatcatgggtaccggtaaagtaaaaggccagaaa
acggttgcggttacagataaagacggtaagacaacggattacacagctgctaaaggcgtt
atcatcgcaacaggtgcccgcgcccgcgaattgccaaacattaaaattgatggccagaag
gtaatcgaataccgtaaagccatgagccttgaaaagcagcctgcctctatgttggttgta
ggttctggcgcaattggaatggaattcgcttacgtatatgcttcgatgggaacgaaagta
accgttgttgaattcctgccaaatctggttccggtcgaagatgaagacatttcaaaagag
atcgcgaaacaatacaaaaagcttggcattgacacttacgtgaactcaacggttgagaca
gttgacgtgtcaggaaatggttgcaaagtttctgtaaaaacgccggacggacaaaagtcc
tttgaagtggatatcgttctttctgctgccggaattgtttccaaccttgaaaacattggt
ttggaagaaacgggcattaaaacggataaaggcaaaatcactgtaaacgaatggtatgaa
accagcgttccaggattttatgcaatcggtgactgcacacctggcccggctttggcacac
gttgctacggctgagggaattatctgtgcagagaaaatcgctggacacaaaacggaagca
ctagattacggaaacattccgggatgtacttactgtcagcctgaaattgcatctgttgga
ctaaccgaaaagaaagcaaaagaagcaggatacgatatcaaagtgggtaaatttccattc
aaagcgtctggtaaggccgttggcgcaggtgttactgatggatttgtgaaagtaattttt
gactcgaaatatggcgagttccttggtgctcacatgatcggcgcaaacgttacagaaatg
atcgctgaggtggtggtggcccgtaaattggaaactacttcacacgagatcatgcgtgcg
atccaccctcaccccactatgtccgaagcattgaaaggcgcgacggaagcagcttacggc
gaggcgattgatttgtag

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