Dyadobacter pollutisoli: ON006_26230
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Entry
ON006_26230 CDS
T09794
Symbol
lysS
Name
(GenBank) lysine--tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
dpf
Dyadobacter pollutisoli
Pathway
dpf00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
dpf00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
ON006_26230 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
dpf01007
]
ON006_26230 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dpf03016
]
ON006_26230 (lysS)
Enzymes [BR:
dpf01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
ON006_26230 (lysS)
Amino acid related enzymes [BR:
dpf01007
]
Aminoacyl-tRNA synthetase
Class II (A)
ON006_26230 (lysS)
Transfer RNA biogenesis [BR:
dpf03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
ON006_26230 (lysS)
Prokaryotic type
Other AARSs
ON006_26230 (lysS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
DUF4332
Methyltransf_23
Motif
Other DBs
NCBI-ProteinID:
WAC11220
UniProt:
A0A9E8SJD1
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All DBs
Position
complement(6349747..6351462)
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AA seq
571 aa
AA seq
DB search
MLLSEQEILRRQKREELMRLGIEPYPTEEFVVNTYAADIVKNYENNKIDYKHVTMAGRLM
GFRIMGSAAFAEFQDSTGRVQLYFRRDDLCPGEDKTLYNTVFKKLLDIGDIIGVTGFVFT
TQTGEISVHVQEFKILNKSLRPLPVVKRDEDGNVHDGFTDPELRYRQRYVDLIVNPEVRD
IFIKRARIITTMRSYFDSKGWLEVETPVLQSIHGGAAARPFTTHHNALDVGLYLRIATEL
HLKRLIVGGFEGVYEFGKLFRNEGMDRTHNPEFTTVELYVAYKDYLWMMEMTEQVLEQVA
LAVNGTTKATFGDVELDFAGPYPRLSITDAIHQYTGLDVDASDEATIRAQCRAWGMEVND
SMGKGKLIDEIFGEKVESHIIQPTFIIDHPVEMSPLTKKHRTKKGMVERFELFVNGREIA
NAYSELNDPIEQRERFEDQLTLKERGDDEAMEMDDDFLRSLEYGMPPTSGIGIGIDRLTM
LLTNNSSIQEVIFFPQMRPEKKAEIAKESDYVDAGVPAVWVPALQKMNILTIEQLKTASP
NKIFNDLGGMRKKLKIEEKMPQLDDVKVWVG
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atgctactaagcgaacaggaaatattaaggcgtcagaagcgcgaagagttaatgcggctg
ggcatagagccctacccgacagaagagtttgtggtgaatacttatgccgcggacatcgtt
aaaaactacgagaacaataagatcgattataaacatgtgaccatggccggcaggcttatg
ggttttcgtatcatgggaagcgccgcttttgccgagttccaggatagcacaggccgcgta
caattgtacttccgccgtgacgatctttgcccgggcgaagacaagactctttacaatacc
gttttcaagaagctgctcgacattggcgatatcattggcgtcacgggatttgtatttact
acccaaaccggcgaaatttccgtacacgttcaggaatttaaaattttaaataaatccctt
cggcctctgcctgtcgttaaacgtgacgaagatggtaatgtgcatgacggttttaccgat
cctgaactgaggtaccgccaacggtatgtggacctgatcgtgaatcccgaagtgcgtgat
atcttcatcaaacgtgcgaggattatcaccaccatgcgctcttactttgactcaaaaggc
tggctggaagtagaaacaccggtattgcaatccattcacggaggcgctgccgccaggcca
ttcacgacgcatcacaatgcattggatgtgggcttatacctgcggattgctactgagctg
cacttgaaaagactgatcgtcggtggatttgagggggtttacgaatttgggaaactgttc
cgtaatgaaggaatggaccgcactcataaccctgagttcacgacggtggaactgtatgtc
gcatacaaagactatttgtggatgatggagatgacggagcaagttctggaacaggtagct
ctggctgtgaatggaactacaaaagcaacttttggcgatgtcgaacttgatttcgcagga
ccatatccacgtttgagtattaccgacgccatacatcaatacacagggttggatgtggat
gcgtccgacgaggctactatacgtgcccagtgccgtgcatggggcatggaagtgaatgat
agtatgggtaaaggcaagcttatcgacgagatttttggagaaaaagttgaaagtcacatc
atacagccgacatttatcattgaccaccctgtggaaatgtcaccgcttacgaaaaagcac
cgcaccaaaaagggaatggtagaacgtttcgagctttttgtaaatggtcgtgaaatcgcc
aatgcatattccgagttgaatgacccgattgagcagcgtgagcgatttgaagatcagctt
acattaaaggagcgcggggatgacgaggctatggaaatggatgatgattttctccggtca
ctggaatacggaatgccgccaacgtcaggtataggtatcggaatcgataggttaactatg
cttctgaccaataattccagcattcaggaagtcattttcttcccgcaaatgcgcccggaa
aagaaagcagaaattgcaaaagaatcagattacgtcgatgcaggcgtaccagctgtttgg
gtgcctgctttacagaaaatgaatatattaacgatagaacaattgaagacagccagcccc
aacaagattttcaatgatctgggagggatgcgtaaaaagctgaaaattgaagaaaaaatg
ccgcagctggacgatgttaaagtctgggtaggctga
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