Dyadobacter pollutisoli: ON006_26525
Help
Entry
ON006_26525 CDS
T09794
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
dpf
Dyadobacter pollutisoli
Pathway
dpf03410
Base excision repair
dpf03430
Mismatch repair
dpf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dpf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ON006_26525 (recJ)
03430 Mismatch repair
ON006_26525 (recJ)
03440 Homologous recombination
ON006_26525 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dpf03400
]
ON006_26525 (recJ)
DNA repair and recombination proteins [BR:
dpf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
ON006_26525 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
ON006_26525 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
ON006_26525 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
WAC11273
UniProt:
A0A9E8N8G1
LinkDB
All DBs
Position
complement(6410125..6411837)
Genome browser
AA seq
570 aa
AA seq
DB search
MIEKRWIHYPEFNPEQQQVVSELTESLKVSPSLATLLVQRGILDFDQSKQFFRPDLTLLH
DPFLMKDMDLAVERLARAIASGEKILVYGDYDVDGTTSVALFYGFLKKTYPNLDYYIPDR
YEEGYGVSWQSIDWAYENGFTLIVTLDCGVKSVDKVTAALERGIDFIICDHHRPGDELPP
AVAVLDPKRDDCPYPYKELTGCGVGFKLLQAFCINQNIDTQTLFDNLDLLVVSIAADIVP
ITGENRILAYYGLQRINAAPRTGIKALIQIAGITGSLDITNVVFGLSPRINAAGRIKHAK
EAVRLLLSEFEDEAFEFAQEINKHNSERRTFDTSITEQALFMIENDDWFIDAKSTVLYKE
DWHKGVIGIVASRCIEKYHRPTIILTQSHGKAAGSARSVPGFDVYEAIEECADLLEQYGG
HTFAAGLTLPLDNIEAFKTRFNDIVSSRILPDQLVPMINIDMLLELDVITPKFYNILRQM
GPFGPGNMTPVFESRNVTLSGRPTTMKEKHIKFDVKQNNSAVFTAVGFGLGHFYPDLASG
RPFSICYSLEENNFRDKKTLQLSLKDIKLH
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atgattgaaaagcgctggatacactaccctgaatttaatcctgaacaacaacaagttgtc
agcgagctcacagaatccctgaaagtgagcccctcgcttgcaacgcttctggtacagcgt
ggtatactcgattttgatcaatccaaacaattctttcgccccgatcttaccttactgcac
gacccatttctgatgaaggatatggatcttgccgtcgagaggctggccagggcgatagca
tccggagaaaagatccttgtttacggtgactatgatgtggatggtactacctcggtggca
ttattctacggatttctcaaaaaaacatatcctaacctcgattattatatccccgaccgc
tacgaggaaggctacggcgtttcctggcagagtatcgactgggcatacgaaaatggcttt
acattaatcgtcaccctggactgcggcgtaaaatcggtagataaggttacggctgcatta
gaaagaggaatcgatttcatcatttgcgatcaccaccgcccgggcgacgagcttcctccc
gccgttgcagtacttgacccaaaacgtgacgattgcccttatccttataaagagctgacc
ggttgcggtgtaggtttcaaattgctgcaggcattttgtatcaaccaaaatattgataca
caaaccttatttgacaatctggacttactggttgtcagcattgccgcggacattgtccct
atcacaggagaaaacaggatacttgcatactacggcttgcaaaggatcaatgctgcacca
agaacgggtattaaggcattaatacaaatagcagggatcaccgggtcactcgacattacc
aatgtagttttcgggttgagcccgagaatcaatgcggccggccggatcaagcatgcaaaa
gaggcagtacggttattattatccgagttcgaggacgaagcctttgaatttgcgcaggag
atcaacaaacataacagtgagcgccggactttcgataccagtatcaccgagcaggcattg
ttcatgattgaaaacgatgattggtttatagatgccaaaagcacagtactatataaggaa
gactggcataaaggtgtgatcggcattgtagccagccgatgcattgaaaaataccatcgc
cctaccattatcctgacccagtcacacggcaaagcagctggatctgcccgttcggtacca
ggttttgatgtatatgaagccattgaagaatgcgccgacttattggaacaatatggcgga
catacatttgcggcaggacttaccttgccactcgacaatattgaagcattcaaaacccgt
ttcaatgacattgtcagcagccgcattctaccagatcagctggtaccgatgatcaacatt
gatatgttgcttgaactggatgtaatcacgcctaaattctataacattctgaggcagatg
gggcctttcggacctgggaatatgactcctgtttttgaatcaaggaacgttacgctttcg
ggcaggcctactacgatgaaagagaagcacattaaatttgatgtaaaacagaataattcg
gccgtttttactgcggttggctttggtctcggtcatttttatccagatttggccagcgga
cgaccgttttcgatatgctactcactggaagaaaataactttcgcgataaaaaaacgtta
caactgtctttgaaagacatcaaacttcactga
DBGET
integrated database retrieval system
