Dyadobacter pollutisoli: ON006_28820
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Entry
ON006_28820 CDS
T09794
Name
(GenBank) Rne/Rng family ribonuclease
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
dpf
Dyadobacter pollutisoli
Brite
KEGG Orthology (KO) [BR:
dpf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dpf03019
]
ON006_28820
03009 Ribosome biogenesis [BR:
dpf03009
]
ON006_28820
Messenger RNA biogenesis [BR:
dpf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
ON006_28820
Ribosome biogenesis [BR:
dpf03009
]
Prokaryotic type
rRNA processing factors
ON006_28820
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
DnaJ_CXXCXGXG
RNase_E_G_Thio
PoNi_N
ATG17_like
Motif
Other DBs
NCBI-ProteinID:
WAC11724
UniProt:
A0A9E8NCF2
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Position
complement(6926878..6928440)
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AA seq
520 aa
AA seq
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MSNELLINSTQKGERIALLQDKRLLEYHVETPDQSFTVGDIYLGTVRKLVAGLNAAFVDV
GFEKDAFLHYLDLGPNINSLNKLTKDVISKRTNSGKLNNFKMEPEIEKLGKIDKVLSKNQ
PILVQIVKEPISTKGPRLSCDISIAGRYIVLVPFSNSVNLSKKITDKQERNRLQRLMSSI
KPANFGVIIRTVATGKDVDELNKDLQDCLDKWENGIKALRDAKPRDRVIGEMNRASSIIR
DMLNESFDSITVDSKEVYDDIKAYIHNIAPDKENILKLHNGKNKLFEQFGLEKQIKSLFG
RSVSLPNGGYLIIEHTEALHVIDVNSGNKSNSEEDQEATALSVNLEAAKEIARQLRLRDM
GGIIVVDFIDMKKAENKRVLFDMMRDEMKGDRSKYTVLPLSKFGLLQITRQRVRPEMNIV
TRETCPTCGGTGTIQASILVSDVIANNLDYILTKQNERGITVSLHPFLHSYFTKGIISEQ
VKWLFHYKTWVKLIKDTSLGVVDFKFHNRYGEEIEIVPGN
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
ttgagtaacgaattactaatcaattctactcaaaagggagaacgtatagcccttttgcag
gataaacgtcttttagaataccacgtcgaaacaccggaccaaagctttaccgttggggat
atctatctcggtactgtaaggaagctggtagccgggcttaatgccgcgttcgttgatgtc
ggttttgaaaaagatgcgttcctgcattatctcgatctggggcctaatatcaactctctc
aacaaacttaccaaggacgttatctccaagcggaccaattcaggcaaattgaataatttc
aagatggagcctgagattgagaagctgggaaaaattgataaagtcctttccaaaaatcag
cctatacttgtccagattgttaaggagcctatttcaacaaaaggcccgagactctcctgt
gacatttccattgccggtcgttacattgtactggttcctttttctaattctgttaacctt
tccaaaaagataacagacaagcaggaaagaaaccgtttgcagcggttgatgtcctctatc
aagcccgctaactttggcgtaattattcgcaccgttgccacaggcaaggatgtggatgag
ctgaacaaagatttgcaggattgccttgacaaatgggaaaatggcatcaaagcgcttcgt
gatgctaagcctcgcgaccgtgtcataggcgaaatgaaccgtgcgtcttccattatccgc
gacatgctgaacgaatcattcgacagcattacagtggattccaaggaagtgtatgatgac
attaaagcttacattcacaacattgcgccggacaaggagaatatcctgaaattgcataat
ggcaagaacaagcttttcgaacaatttggtttggaaaagcagatcaagtcattattcggc
cgctctgttagtcttccgaatggtggttacctgatcattgagcatactgaggcattgcac
gttatcgacgtaaacagcggcaataaatccaattctgaggaagatcaggaagctaccgca
ttaagcgtaaacctcgaagcagctaaggaaattgcccgtcagttgcgccttcgtgatatg
ggtggtatcatcgtcgtcgattttatcgacatgaagaaagcggaaaacaaacgcgttctt
ttcgatatgatgcgagacgaaatgaaaggagaccgttcgaaatatacggtgttaccactt
tcaaaattcgggttattacaaattacacgccaacgtgtaagacctgaaatgaacattgtt
acccgcgaaacatgccctacttgcggcggaacgggtaccattcaagcgagtatcctggtg
tctgatgtaatcgccaacaacctggattacattttgaccaaacaaaatgaacgtggaatt
accgtttcactccacccattcttgcattcttattttacaaaagggatcatttctgaacag
gtaaaatggcttttccattacaaaacctgggttaaactgatcaaagacacttccctggga
gttgttgatttcaagttccataaccgttacggcgaggaaattgagattgtaccgggtaac
tga
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