Dyadobacter pollutisoli: ON006_29570
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Entry
ON006_29570 CDS
T09794
Name
(GenBank) AAA family ATPase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
dpf
Dyadobacter pollutisoli
Pathway
dpf03420
Nucleotide excision repair
dpf03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dpf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ON006_29570
03430 Mismatch repair
ON006_29570
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dpf03400
]
ON006_29570
Enzymes [BR:
dpf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ON006_29570
DNA repair and recombination proteins [BR:
dpf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ON006_29570
MMR (mismatch excision repair)
Other MMR factors
ON006_29570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
Viral_helicase1
UvrD_C
UvrD_C_2
AAA_30
DUF6831
SLFN-g3_helicase
DEAD
nSTAND3
ResIII
DAP3
AAA_11
AAA_7
Motif
Other DBs
NCBI-ProteinID:
WAC11867
UniProt:
A0A9E8SPG2
LinkDB
All DBs
Position
complement(7120651..7122549)
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AA seq
632 aa
AA seq
DB search
MADEGLEPEVVSIFEHIDKGENFLLSGGAGSGKTYSLVQVIRTCIERYPYSKVACMTYTN
AAVKEIERRIDNKNLNVTTIHDFLWDNIKSFQKDIKKALVSLLNSEDSKIKSPDGAVGPD
FFDHLPEGIQYKEWTRVKDGHISHDEVIELAHEMFKSNKLLCDILKDRFQFVFLDEYQDT
HPLVVKVLLEHLQVSKKQNIIGFFGDSMQSIYDDSVGDLNAYIVNGSVKEVKKEQNRRNP
NTVIDLANKLRSDGLQQRPSTDTNAPNMEAGVVVDGNIKFVYSNGQNLDDVKKSIAWDFT
DVKQTKELNLTHNLIAPRAGFATLMEIYDGDKILDFKRRVTDYIKDEQITTDFSAYTFGE
VIDELGVTPTAGQQTFIDDNIGLFNTARDYPHASFSKIYVDKEALIDDKKHDEQDENKKG
SKRDALIKHLFKIELNIQLYQENRCNEFLRRTEFKVTSVADKIKLKENIEALANGTVATI
GEVIDLADAVGICKKDDKLARFIDKNEYLYKRIANVNYSEFRKLYSYLEGQTPFSTQHKI
KGEEFENVLIVLDNGGWNKYNFQYLLHPDIFNGLTPAKKKSYPGILSRTQKIFYVCCTRA
KKNLVVYYDNPDDRIVQRAKEWFGDANVREVK
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atggctgatgaaggattagagcccgaagttgtctctattttcgagcatatagataaaggc
gaaaactttctcctcagcggtggagctggaagtggtaaaacatattcgttagttcaagtc
attagaacttgcattgaaagatatccatattccaaagttgcctgtatgacttatacaaat
gcagctgttaaggagatcgaacgacgaattgacaataaaaatctgaacgtgacaacgatt
cacgattttctctgggacaacataaaatcattccaaaaagacattaaaaaggctcttgta
tctttgctaaatagtgaggattccaagatcaaaagccccgatggagctgttggtcccgac
ttttttgatcatctaccagagggcattcaatacaaagaatggacgagagtcaaagacggc
cacatctcgcatgacgaagtaatcgagctcgcgcacgaaatgtttaaaagcaacaagcta
ctctgcgatatccttaaagatagatttcaattcgtatttttagacgagtaccaggacacc
cacccactcgttgttaaagttctactggagcatttacaggttagtaagaagcaaaatatt
attggattcttcggagactccatgcagtcaatttatgatgacagtgtcggagacttgaat
gcctatatcgtaaatggcagtgttaaagaagttaaaaaagaacaaaacaggcgaaaccct
aatacggtaatcgacttggctaacaagttacgttcagacggcttgcaacaaaggccgtct
accgacacgaatgcccctaatatggaggctggtgtcgtcgttgatggcaatatcaagttc
gtttattccaatggccaaaatttagatgacgtaaaaaaatcgattgcgtgggattttact
gatgtcaaacaaaccaaagagcttaatcttactcataatcttatagcgccgagagcgggt
ttcgccactttgatggaaatttacgacggcgacaagattttagattttaaaaggcgcgtg
accgattatatcaaggatgaacagataactaccgatttttcggcatatacgttcggcgaa
gtgattgatgaactaggggttactccaactgcaggacaacaaacatttattgatgacaac
attggcctattcaataccgcgcgcgactatccgcatgcatctttcagcaaaatatacgtc
gacaaagaggcccttattgatgataagaagcatgatgagcaggatgaaaacaaaaaaggc
tcaaaacgagacgcattgatcaaacacctctttaaaatcgaactcaatattcaattatat
caagaaaataggtgcaacgaatttctgagacgaacagaatttaaggtaacatctgtagct
gataaaataaaacttaaagaaaatattgaagcgctagcaaatgggactgttgcgacgatt
ggtgaagttatagatttagctgacgcagttggcatttgtaaaaaagatgacaaactagca
aggtttatcgataaaaatgaatatctgtataagagaattgccaacgtcaactactctgag
tttcggaaattatattcctatttagagggccagactcccttttctacgcaacataaaatt
aaaggagaagaatttgagaacgtcttgatagtgctggataatggtggatggaataaatac
aattttcagtacctcctccatcctgatatattcaatggcctcactccggcaaaaaagaag
tcatatcctggtatattgtcacgcactcaaaaaatattctacgtttgctgcacacgcgca
aagaaaaatttagttgtgtattatgataatcctgacgaccgcattgttcaaagagcaaaa
gagtggtttggtgacgccaatgtacgtgaagtcaaatag
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