Dyadobacter pollutisoli: ON006_31795
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Entry
ON006_31795 CDS
T09794
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
dpf
Dyadobacter pollutisoli
Pathway
dpf02020
Two-component system
dpf02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
dpf00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
ON006_31795 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
ON006_31795 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dpf03021
]
ON006_31795 (rpoN)
Transcription machinery [BR:
dpf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
ON006_31795 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
DUF7754
DUF4661
Motif
Other DBs
NCBI-ProteinID:
WAC12295
UniProt:
A0A9E8N986
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All DBs
Position
7627808..7629253
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AA seq
481 aa
AA seq
DB search
MQRQTQTQRQTLKYSPLQIQMLNLLHLTTMELEQRIKEELEENPILEEGKEENASEDTAD
EFQDPADAAGSGDDTSVQDYYDWDEFRDDDIPDYKTYANNQSPDNELYTRPMVESISFRD
DLKQQVHFLRLDERQQLIADFILDSLDEDGFLRREPEVIADDISFANSMFIDTDEVNQML
KVIQQLDPAGIAANDLRECLLIQLARSENQNDIWKWACKIVTDAFDELGSRNYDKIMRIT
GLDEESLKKAIQLITTLNPKPASGLRNDSLVNESIKPDFMLRYTEDGEIEVQLTWGNSPA
LKLNKLFTKMAEQKNDKATNQFLKNKMNSAKWFIDAIKQRENTMLSTLKAIVKLQYDYFQ
SGDIKKLRPMILKDVAEIIDMDISTVSRVTTNKYVQTPFGIVLLKDLFTEGVTNEDGTEV
SNREIQEAIREIVSEEEKRHPYNDQQITDMLSDRGYSVARRTVAKYREQLNIPTARLRVT
I
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgcaaagacagacgcagacgcaaagacagacattgaaatactctccattgcaaattcag
atgctgaatttactgcatttgacgacaatggaattggagcaaagaataaaggaagaactg
gaagaaaatccgatactggaagagggcaaagaggagaatgcgtccgaagatactgctgac
gaatttcaagatcccgctgatgctgcgggctcgggggacgatacttccgtacaggattat
tacgattgggatgaatttcgggacgacgacattccggattacaagacttatgctaacaac
cagtcgcccgataatgaattatatacacgtccaatggtggaatccatctcattccgggac
gatttgaaacaacaggtacacttcctgcgactggatgaaagacagcagcttatcgccgat
tttattcttgactcactcgacgaagatggctttttgaggagagaaccagaggtgatcgcg
gacgatatttcattcgcgaacagcatgtttatcgacaccgacgaagtgaaccagatgttg
aaagttatccagcagctggatcctgcgggaatcgccgccaatgatctcagagaatgtctg
ctgatccagcttgcgaggtcggagaatcagaatgacatttggaaatgggcgtgcaagatc
gttaccgatgcatttgacgaactgggttcacggaattacgacaagatcatgcgcataacc
gggctagacgaggaatcattgaaaaaagcaatccaactcattacaacccttaatccaaaa
ccagcctcgggcttacgcaacgattcgcttgtgaatgaaagtattaagccggactttatg
ctgaggtatacagaggatggtgagatagaggtacagcttacctggggaaatagtccggca
ttgaaactgaacaagctgtttaccaaaatggcggagcagaaaaacgacaaggcgaccaac
cagttcctgaaaaacaagatgaattcggcgaaatggtttatcgatgcgatcaagcagaga
gaaaataccatgctgagcacgctcaaagccattgtcaagctgcaatacgattacttccag
tccggcgacatcaagaagctgcgcccgatgatcctgaaagatgtggcggaaattattgat
atggatatctcaactgtttcccgcgtcacgacgaacaaatacgttcagacgccattcggg
attgtgttactgaaagatctgttcacggaaggagttacgaatgaggacggaacggaagta
tcaaaccgggaaattcaggaagcgatcagggaaattgttagtgaagaagaaaaaaggcac
ccttataacgatcaacagattacagatatgctttcggacagaggatattcggtagcaagg
cggacagtggccaagtatcgtgagcaattgaatattcctactgctagactgcgtgttacc
atttaa
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integrated database retrieval system