Desulfovibrio piger: DESPIGER_0146
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Entry
DESPIGER_0146 CDS
T04638
Name
(GenBank) DNA-binding protein HU
KO
K03530
DNA-binding protein HU-beta
Organism
dpg
Desulfovibrio piger
Brite
KEGG Orthology (KO) [BR:
dpg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dpg03032
]
DESPIGER_0146
03036 Chromosome and associated proteins [BR:
dpg03036
]
DESPIGER_0146
03400 DNA repair and recombination proteins [BR:
dpg03400
]
DESPIGER_0146
DNA replication proteins [BR:
dpg03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
DESPIGER_0146
Chromosome and associated proteins [BR:
dpg03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
DESPIGER_0146
DNA repair and recombination proteins [BR:
dpg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
DESPIGER_0146
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
DUF6900
HU-CCDC81_bac_1
Motif
Other DBs
NCBI-ProteinID:
SFV72048
UniProt:
A0A1K1LBH4
LinkDB
All DBs
Position
I:complement(148736..149059)
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AA seq
107 aa
AA seq
DB search
MSQEQTQRPHLATKAELIKDVLRITREEDARDLHAVDVEVVLDALAEACAARLAAGDDVT
LPGIGRLKVKARAARMGRNPRTGEPMSLPPKRGVTFNAGKKLLGRIE
NT seq
324 nt
NT seq
+upstream
nt +downstream
nt
atgagtcaggaacagacacagcgcccccatctggccaccaaggcggaactgatcaaggac
gtgctgcgcatcacacgcgaggaagacgcccgcgatctccacgccgtggacgtggaagtt
gtcctggatgctctggccgaagcctgcgctgcacgactggctgccggggatgacgtgacg
ctgccgggcatcggccgcctgaaggtaaaagcacgggccgcccgcatggggcgtaacccg
cgtacaggcgagcctatgtcccttccacccaagcgtggtgtgacgttcaatgccgggaaa
aagctgctcgggaggatcgagtaa
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