Desulfovibrio piger: DESPIGER_0292
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Entry
DESPIGER_0292 CDS
T04638
Name
(GenBank) Hypothetical ATP-binding protein UPF0042, contains P-loop
KO
K06958
RNase adapter protein RapZ
Organism
dpg
Desulfovibrio piger
Brite
KEGG Orthology (KO) [BR:
dpg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dpg03019
]
DESPIGER_0292
Messenger RNA biogenesis [BR:
dpg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
DESPIGER_0292
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PapZ_C
RapZ-like_N
AAA_18
AAA_16
AAA_30
AAA_22
AAA_33
SKI
AAA_29
Herpes_Helicase
AAA_21
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
SFV72185
UniProt:
A0A1K1LBU9
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All DBs
Position
I:288549..289451
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AA seq
300 aa
AA seq
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MSQTSSDEAATPVQVCIVTGLSGAGKSTALQVFEDLRYFTVDGLPAGLAAEMADMMRRES
MERFRGMALGMDMRQQDFLEELNVALARLAEHGVRPMLLFLEAGPQELMRRYATTRRPHP
LEREGMGLEDALREERARLAPVREMADLVIDTSRFSIHDLRRAIQKRWSRTPGRLRAIRV
NVISFGFKYGVPREADFVFDLRFLPNPYFVEKLRPLSGKDKAVRDYVFATEAAQEFEKKL
FDLVRFMLPQMEAEGRYRVAIAVGCTGGRHRSVATAEALFQMLRQADYPASLEHRHLELG
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgagccagacatcatccgatgaagcggccacgcctgtccaggtctgcatcgtcaccggc
ctttcaggggccggtaagagtacggcgttgcaggtctttgaggacttgcgctattttacc
gtggacggactgcctgccgggctggccgccgagatggcggacatgatgcggcgcgaatcc
atggagcgtttccggggcatggccctgggcatggacatgcggcagcaggattttctggaa
gagctcaacgtggcccttgcccggcttgcggaacacggtgtccggcccatgctgctcttt
ctggaggccggaccgcaggagctcatgcggcgttacgccacgacccgccggccgcacccg
ctggaacgcgagggcatggggcttgaggatgccctgcgcgaggagcgcgcgcggctggcc
cctgtgcgcgagatggcggatctggtcatagataccagccgtttttccatccatgacctg
cgccgtgccatccagaagcgctggagcaggacgccgggcaggctgcgggccatccgtgtc
aacgtcatctcgttcggcttcaagtatggtgtcccgcgcgaggcggatttcgtctttgac
ctgcgcttcctgcccaacccctattttgtagagaaattgcgtcctctcagcggcaaggac
aaggcggtccgtgactatgtctttgccaccgaggcagcgcaggaattcgagaaaaagctt
ttcgacctggtgcgcttcatgctgccgcagatggaagcggaaggccgctaccgggtggcc
atagccgtgggctgcaccggtggccgccaccgctccgtggccacggccgaggccctgttc
cagatgctgcgccaggcggattatccggccagtcttgagcacaggcaccttgaacttggc
tag
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