Desulfovibrio piger: DESPIGER_0301
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Entry
DESPIGER_0301 CDS
T04638
Name
(GenBank) FIG003033: Helicase domain protein
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
dpg
Desulfovibrio piger
Brite
KEGG Orthology (KO) [BR:
dpg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dpg03400
]
DESPIGER_0301
Enzymes [BR:
dpg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DESPIGER_0301
DNA repair and recombination proteins [BR:
dpg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
DESPIGER_0301
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
UvrD_C_2
AAA_19
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
SFV72194
UniProt:
A0A1K1LBV4
LinkDB
All DBs
Position
I:complement(297416..300706)
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AA seq
1096 aa
AA seq
DB search
MASLYQVKASAGSGKTYDLTRRFLCLLAACGAPGPAAASSCGLGSGPSGWDEILAITFTN
AAAGEMRDRVIGRLKAIALGTPEQDIPLTPGMAARWLDVILRDLASLNIRTIDSLLHAIV
RSASLQLDLPPDFQPAFVSMDAVTPYLETLLNQASQGNEAMEKLLRDLYWAIVHVQQSKG
FNAGEKLGDIIRPLLDGILRGEFTDIAGPEELGERHRQHWHRTIGLVTDVLEAEEGAGTR
LHATSRKALVRLQERDEGAFKLKSIAEPGVDRFLTAKTKRTEALMTALEALVAWLPEFRR
RHALLRSARHFAPAVQLATLLVHAMRANQQQEGTLPAVLVPELAASVLGGSFGVSEALCR
LGSRLQYFLLDEFQDTSREQWQALSPLVEEALSRGGSLTWVGDVKQAIYGWRGGDAALFD
GIEGPLRRLAPDVRHETLTANWRSCRQIIAHNNALFSPLEDAAVARQALAALMPQDTPDD
LLDGYAGRVAAGYAGTAQDFSPRSASGGLVRVEAIEGDNSEGLNAAVLVRLRRMILHELA
PRRSWQDMLVLVRSNAQAALVAEDLAAASIPIVTENSLLLSTHPLVIQSVALLQFLCNAE
DELALWTVVTGSLVQQGPLPVPGLQELHDTCVGRGRTSLLPHLQQQFPDFWASVLAPFHN
QAGLMTPYDTIMEWYDRLQVFQRCPEADVFLRCFLEVLKNAEDQGLATLPDFLAHWQEKG
GEEKVPMPEGIDAVRIMTVHKSKGLEAPVVLLPWTDASLKANDPVLMEEDGLRMVCKNGP
HCGRVYYEALLRQATELLNQFYVAFTRAREELYVFRTSAATVRRGCGSHALDVLWQQAGL
TVPYQLEGGDDVLRPVRPPAAEDGEEETDTAPDAATADADPGQLPRGQAAAPSVPEEGWR
PMQWLPRLKIYRNPLERMHFSARDRGTLLHACLEQLPLGGLSEDNIRVAVREVLATIPLA
DGQDGPDRENVAADMESCLLWLLRLPQFGLWQRRGVPEQSMLEADGPRRELLRADLIVPL
SWGTLVVDYKSGRVMDEHVRQVRRYLRCLEQGGTAVARGLLIYLDRQAFRLVEPGSASEL
FTDLGAYPRYFCEDEA
NT seq
3291 nt
NT seq
+upstream
nt +downstream
nt
atggctagcctgtatcaggtcaaggcatccgccgggtcgggcaagacctatgacctgacc
cggcgttttttgtgcctgctggcggcctgcggcgcgccggggcccgccgccgcatcttcc
tgcgggctgggcagcggtccctccggctgggacgagatcctggccatcaccttcaccaat
gccgccgccggcgagatgcgcgaccgcgtcatcggacggctcaaggccatcgccctgggc
acgccggaacaggacatccccctgacgcccggcatggccgcccgctggctggacgtcatc
ctgcgggacctggccagcctcaacatccgcaccatcgacagcctgctccacgccatcgtg
cgttcggcctccctgcagctggacctgcccccggacttccagcccgccttcgtgagcatg
gacgccgtgaccccctatctcgagaccctgctcaaccaggcatcccagggcaacgaggcc
atggagaagctgttgcgcgacctctactgggccatcgtccatgtgcagcagagcaagggc
ttcaatgccggggaaaagctgggcgacatcatccgccccctgctggacggcatcctgcgc
ggcgaattcacggacatcgcgggcccggaagagctgggcgaacgccaccggcagcactgg
cacaggaccatcggtctggtcacggacgtgctggaggcggaagaaggcgccgggaccaga
ctccatgccacgagccgcaaggccctggtgcgcctccaggagcgggatgaaggggccttc
aagctcaagtccatcgccgagcccggggtcgacagattcctcacggccaaaacgaaacgc
acggaagccctgatgacggccctggaggcgctggtcgcctggttgccggagttcagacgc
cggcatgccctgctgcgttcggcccgccatttcgctccggccgtccagctggccaccctg
ctggtccacgccatgcgggccaaccagcagcaggagggcacgctgcccgccgtcctggtg
ccggagctggccgcttcggtgctcggcggcagcttcggcgtctccgaggccctgtgccgt
ctgggcagccgcctgcaatatttcctgctggacgagttccaggataccagccgcgaacag
tggcaggccctgagcccgctggtggaagaggccctttcccggggcggttccctgacctgg
gtgggcgatgtcaagcaggccatctacggctggcgtggcggggatgcggccctctttgac
ggcatcgaagggcccttgcgccgtctggccccggacgtgcgccacgagacgctcacggcc
aactggcgcagctgccgccagatcatcgcgcacaacaacgccctgttctcgcccctggag
gatgccgccgtggcccggcaggcccttgccgccctgatgccgcaagacacgccggacgac
ctgctggacggctatgcgggacgcgtggccgcgggctatgccgggacggcccaggacttc
tcgccccggtccgcttccggcggcctcgtgcgcgtggaagccatcgaaggcgacaacagc
gaggggctcaatgccgccgtgctggtgcgcctgcgccgcatgatcctgcacgaactggcc
ccgcgccgctcctggcaggacatgctggtgctggtgcgcagcaacgcccaggccgcgctg
gtggccgaagatctggccgccgccagtatccccatcgtcacggagaacagcctgctgctg
tccacccatcccctggtgatccaaagcgtggccctgctgcagttcctgtgcaatgcggaa
gacgagctggccctctggaccgtggtcacgggcagtctggtgcagcaggggcccctgccg
gtccccggcctgcaggagctgcacgatacctgcgtgggccgcggcaggacttcccttctg
ccgcacctgcagcagcagttcccggatttctgggcttccgtgctggcccccttccacaat
caggcggggctcatgacgccgtatgacacgatcatggagtggtacgaccgtctgcaggtc
ttccagcgctgtcccgaagcggatgtcttcctgcgctgtttcctcgaagtgctcaaaaac
gccgaggatcaggggctggccaccctgcccgacttcctggcccactggcaggaaaagggc
ggcgaagaaaaagtccccatgcccgaaggcatcgacgccgtgcgcatcatgaccgtccac
aaatccaagggcctcgaggcccctgtggtcctcctgccctggaccgacgcttccctgaag
gcgaacgatccggtgctcatggaggaagacggcctgcgcatggtctgcaaaaacggcccc
cattgcggcagggtctattatgaggccctgctgcgtcaggccacggaactgctcaaccag
ttctatgtggccttcacccgggcacgggaagagctgtacgtcttccgtaccagtgccgcc
accgtgcgcaggggctgcggcagccacgctctggatgtgctctggcagcaggccgggctc
acggtcccctaccagctggaaggcggggacgacgtgctgcgcccggtccggccgccggct
gccgaggacggggaggaagagacggacacggcaccggacgccgcaacggccgatgccgat
cccggccagctcccccgcgggcaggcggcagcgccgtctgtgccggaagagggctggcgg
cccatgcaatggctgccccggctcaagatctaccgcaacccgctggagcggatgcatttt
tccgcacgggatcgcggcaccctgctccatgcctgtctggagcagctgcccctgggcggc
ctcagtgaggacaatatccgggtcgccgtgcgggaagtccttgccaccatcccccttgcc
gacgggcaggacggccctgacagggaaaatgtcgccgccgatatggaatcctgcctgctc
tggctgctgcgccttccccagttcggcctgtggcagcggcgcggcgtcccggagcaatcc
atgctggaagccgacggcccccgccgggagcttttgcgtgccgacctcatcgtccccctg
tcctgggggaccctggtggtggattacaagagcggcagggtcatggacgaacatgtacgg
caggtacggcgctatctgcgctgcctggaacagggcggcacagcggtggcccgcggcctg
ctcatctatctggacaggcaggccttccgcctggtggagcccggcagcgcctcggaactg
tttacggatcttggggcctatccccgctatttctgtgaggacgaggcatga
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