Desulfovibrio piger: DESPIGER_0485
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Entry
DESPIGER_0485 CDS
T04638
Name
(GenBank) Diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
dpg
Desulfovibrio piger
Pathway
dpg00300
Lysine biosynthesis
dpg00470
D-Amino acid metabolism
dpg01100
Metabolic pathways
dpg01110
Biosynthesis of secondary metabolites
dpg01120
Microbial metabolism in diverse environments
dpg01230
Biosynthesis of amino acids
Module
dpg_M00526
Lysine biosynthesis, DAP dehydrogenase pathway, aspartate => lysine
dpg_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
dpg00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
DESPIGER_0485
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
DESPIGER_0485
Enzymes [BR:
dpg01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
DESPIGER_0485
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
SFV72373
UniProt:
A0A1K1LCF6
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Position
I:complement(484191..485471)
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AA seq
426 aa
AA seq
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MSQIRSSYTDSINFYEGHSPLDLAQQFGTPLYVYNEAVLRQRCRELKALSSLPGFGVNYS
VKANTNPVLLRIIREEGLVVDAMSPGELYMDRLAGFTADEILYISNNISEAELRNAVEHG
VLVSVDSLSQVETLGRVNPGGKVMVRFNPGIGAGHHAKVVTAGKETKFGVSPELLDDLFA
ILKKHDLHLAGINQHIGSLFMEADGYIAAADVLLHLAERLPADVLQKLEVIDFGGGFGIP
YHKYENQPRLDMDDLGRRLHGLISGWAEKTGYTGRFLVEPGRYVVAECGILLGSVNATKT
NGDRRYAGTDLGFNVLVRPAMYDSFHDVEVYRQGAQGPDTGTVEQSVVGNICESGDILAK
NRQLPLLHEGDVLGVLDAGAYGFVMSSSYNQRCRAAEILIQTDGSVRLIRRRETLEDLAA
CYEGLL
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgtcccagatccgctccagctataccgacagtatcaatttttatgaaggccattctcct
ctggatctggcccaacagttcggtacgccgctctatgtctacaacgaggccgtgctgcgc
cagcgctgccgcgaactcaaggccctttcctccctgcccggcttcggtgtcaactattcg
gtcaaggccaacaccaaccccgtgctgctgcgcattatccgtgaagaaggcctggtggtg
gatgccatgagccccggcgagctgtacatggaccggctggcgggcttcaccgccgacgag
atcctttacatctccaacaacatctctgaggccgagctgcgcaatgccgtcgagcacggt
gtgctggtcagcgtggattccctttcccaggtggagaccctgggccgcgtcaaccccggc
ggcaaggtcatggtgcgcttcaaccccggcatcggtgcgggccatcacgccaaggtcgtc
acggccggcaaggagacaaaattcggcgtttcgccggaactgctggacgacctgttcgcc
atcctgaagaaacatgacctgcatctggccggcatcaaccagcacatcggttccctgttc
atggaagccgacggctatatcgccgccgccgacgtcctgctgcacctggccgaacgcctg
cccgccgatgtgctgcaaaagctggaagtcatcgacttcggcggcggtttcggcatcccc
taccacaaatacgaaaaccagccccgtctggacatggacgacctgggccgccgcctgcac
ggcctcatcagcggctgggcggaaaagaccggctacaccggccgcttcctggtggagccc
ggccgctatgtggtggccgaatgcggcatcctgctggggagcgtcaatgccaccaagacc
aacggcgacaggcgctatgccgggaccgacctgggtttcaacgtgctggtgcgcccggcc
atgtacgactccttccacgatgtggaagtgtatcgccagggcgcgcagggcccggatacc
gggaccgtggagcagagcgtcgtgggcaatatctgcgaaagcggcgacatcctggccaag
aaccgccagctgcccctgctgcatgaaggcgacgtgctgggcgtgctggacgccggggcc
tacggcttcgtgatgtcttcctcctacaaccagcgttgccgggccgccgagatcctgatc
cagaccgacggcagcgtgcgcctgatccgccgccgcgagaccctggaggacctggccgcc
tgttacgagggcctgctgtaa
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