Desulfovibrio piger: DESPIGER_0576
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Entry
DESPIGER_0576 CDS
T04638
Name
(GenBank) TPR domain protein
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
dpg
Desulfovibrio piger
Brite
KEGG Orthology (KO) [BR:
dpg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dpg03009
]
DESPIGER_0576
Ribosome biogenesis [BR:
dpg03009
]
Prokaryotic type
ribosomal protein modification factors
DESPIGER_0576
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
YcaO
TPR_2
TPR_1
TPR_12
TPR_16
TPR_8
TPR_14
TPR_19
ANAPC3
TPR_6
CFAP70_mid_TPR
CFAP70_TPR_C
TTC22_N
TPR_9
TPR_MalT
RMD1-3
NatA_aux_su
TPR_CcmH_CycH
Motif
Other DBs
NCBI-ProteinID:
SFV72461
UniProt:
A0A1K1LCP8
LinkDB
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Position
I:complement(585192..586937)
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AA seq
581 aa
AA seq
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MSTTTLPVIRLQPCPKGYTRDLDKTISPQETYERVQARMQATGLDILAEVRRVDVGRLGI
PVYLSVCGRDARGIMPTRKQMGKGSSPEQARASALMELMERFAFFSFWQRLPHMVSATWA
EAEDRFGKDLLPIEEICRSVEDSLSPEQAREAMSTLRWHFFPATHLADGRTVWLPLDWFK
LLGEFNGTSAGNSPEESLLQGLSELVERHVCCRIDRERLTTPTIDPHEVDDPTLRDLLAA
FEREGIHIMLKDFSLGMPLPTVGAVAWDPATFPARSEIVFTAGTAASPAKAAIRAVTEIA
QLGGDFCTQACYEASGLSKFERLEGIQWLLEGPVCRLSDLPSVEAPDIRDELLRALHGLE
PVQVYAVETTHPALGVPAHYCIAPGLAFRERDRNQSIGLFVGRKLAEEADEQTALHGLAV
LERCYPGAHFLPFFRAMLALRAERFDEARDLFAQARPLQPENDAKGLAAFYEGYVSTLTG
DWERALPPLRDAVALCPDMKEYGNLLGVCLFKLKRYEEAAAAFRAVLKVDKGSVMDLANL
GLCEKFLGQREAAMEHLAAALEVDPSLDFARTHLEELKASL
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atgagcacgaccactcttcctgtcattcgtctgcagccctgccccaagggctatacccgc
gacctggacaagaccatctcgccccaggagacctatgaacgcgtccaggcccgcatgcag
gccaccggtctggacatcctggccgaagtccgccgcgtggacgtgggccgtctgggcatc
ccggtctacctcagtgtctgcggcagggacgcccgcggcatcatgcccacccgcaagcag
atgggcaaaggttcctcgccggaacaggcccgtgcctccgccctgatggagctgatggaa
cgctttgcctttttcagtttctggcaacgcctgccgcatatggtcagcgccacctgggcc
gaggccgaagatcgcttcggcaaggacctgctgcccatcgaggagatctgccgctccgtg
gaggacagcctttccccggaacaggcccgcgaagccatgagcaccctgcgctggcatttc
tttcctgccacacatctggctgacggccgcactgtctggctgccgctggactggttcaag
ctgctgggggaattcaacggcacgtccgcaggcaacagcccggaagaatccctgctgcag
gggctttccgagctggtggagcgccatgtctgctgccgtatcgaccgggaacgcctgacc
acccctaccatcgatccgcacgaagtggacgatcccaccctgcgcgacctgctggccgct
ttcgagcgggaaggcatccatatcatgctcaaggacttctccctgggcatgccgctgccc
actgtcggtgcggtggcctgggacccggccaccttcccggcccgctccgagatcgtgttc
acggccggtaccgcggcctctccggccaaggccgccatccgtgccgtcacggagatcgcc
cagctgggcggtgacttttgcacgcaggcctgctacgaggcctccggtctttccaagttc
gaacgcctggaaggcatccagtggctgctggaaggccccgtctgccgtctgtccgacctg
cccagcgtggaagcgcccgacattcgcgacgagctgctccgggcgctgcatggtctggag
ccggtgcaggtctacgccgtggagaccacccatcccgcgctgggggtcccggcccactac
tgcatcgctccgggcctcgccttccgcgaacgtgaccgcaaccagagcatcggcctgttc
gtgggccgcaagctggccgaagaggcagatgagcaaacggccctgcatggtctggccgtg
ctggagcgctgctatcccggcgcgcatttcctgccttttttccgcgccatgctggccctg
cgcgcggagcgttttgacgaggcccgcgaccttttcgcccaggcccgccccctgcagccg
gaaaacgacgccaagggtctggccgccttttacgaaggctatgtctccacgctgaccggc
gactgggaaagggccctgcctcccctgcgcgatgccgtggccctgtgcccggacatgaag
gaatacggcaacctgctgggcgtctgcctgttcaagctcaagcgctatgaagaggccgcc
gctgccttccgcgccgtgctcaaggtggacaagggctcggtgatggatctggccaatctg
ggcctgtgcgagaaattcctgggccagagggaagccgccatggaacatctggcggccgca
ctggaagtggatccttcgctggactttgcccgcacgcacctggaagaacttaaagcatca
ctttaa
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