Desulfovibrio piger: DESPIGER_0594
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Entry
DESPIGER_0594 CDS
T04638
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
dpg
Desulfovibrio piger
Brite
KEGG Orthology (KO) [BR:
dpg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dpg03021
]
DESPIGER_0594
Transcription machinery [BR:
dpg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
DESPIGER_0594
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HTH_11
Sigma70_r3
GntR
SsdA_C
Motif
Other DBs
NCBI-ProteinID:
SFV72478
UniProt:
A0A1K1LG91
LinkDB
All DBs
Position
I:complement(602276..603370)
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AA seq
364 aa
AA seq
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MKKSNKNVPDPSSSAPVADVEVLDAADEDSSLDPLEELDEDSLDQGEILDVGEDGPMLLT
EGSHDESSLPAPSMPRLPSTGGRDSLQLYLREVSRFPMLKPEEEHELAVRVRDHNDPDAA
FRLVSSHLRLVVRIAMDFQRRWMQNVLDLVQEGNVGLMRAVNKFDPDKGIKFSYYASFWI
KAYILKFIMDNWRMVKIGTTQVQRKLFYNLNRERQKLVAQGFDPDAAMLSERLGVSEEQI
TEMDQRLAANDLSLNAQVGEEAGGATRMDFLPALGPGIEDSLGDSEVAELLREKLKTILP
KLNEKELYILQNRLLTDDPVTLREIGERYNVTRERVRQLEARLLEKIRQHLALDIKDFSD
AWIQ
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaagcaacaaaaatgtccctgacccctcttcttccgcgcccgtggcggacgtg
gaagtcctggatgccgccgacgaagacagctctctggaccccctggaagagctcgacgag
gacagcctcgaccagggtgagattctggatgtgggcgaagacggccccatgctgctcacg
gaaggcagccatgacgaatccagcctccctgcgccgtccatgccccgcctgccgtctacc
ggcggccgggacagtctgcagctttatctgcgcgaggtgagccgtttccccatgctcaag
cccgaggaagagcacgagctggccgtgcgggtacgcgatcacaatgaccccgacgccgcc
ttccggctggtgtcgtcacatctgcgccttgtggtacgcatcgccatggatttccagcgc
cgctggatgcagaacgtcctcgaccttgtccaggaaggcaatgtgggccttatgcgggcc
gtcaacaagttcgaccccgacaagggcatcaagttctcctactatgcctcgttctggatc
aaggcctatatcctcaagttcatcatggacaactggcgcatggtcaagatcggcaccacc
caggtgcagcgcaagctgttctacaatctcaaccgcgagcggcaaaagctggtggcccag
ggcttcgaccccgatgctgccatgctctccgagcgtctgggcgtcagcgaggaacagatc
accgagatggatcagcgccttgccgccaatgacctttccctcaatgcgcaggtaggtgaa
gaggccggcggtgccacccgcatggatttcctgccggccctgggaccgggcatcgaagac
agcctgggggattccgaagtggcggaactgctgcgcgaaaagctcaagaccatcctgccc
aagctcaacgaaaaggaactctacatcctgcagaaccgcctgctgacagacgaccccgtc
accttgcgcgagatcggtgaacgatataacgtgacccgcgagcgtgtacgccagctggaa
gcccgtcttctggagaagatccgccagcacctggccctggacatcaaggacttttccgac
gcctggattcagtga
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