Desulfovibrio piger: DESPIGER_0609
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Entry
DESPIGER_0609 CDS
T04638
Name
(GenBank) Exonuclease SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
dpg
Desulfovibrio piger
Brite
KEGG Orthology (KO) [BR:
dpg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dpg03400
]
DESPIGER_0609
DNA repair and recombination proteins [BR:
dpg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
DESPIGER_0609
Archaeal homologous recombinant proteins
DESPIGER_0609
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
SbcD_C
Metallophos_2
FBPase_2
Motif
Other DBs
NCBI-ProteinID:
SFV72493
UniProt:
A0A1K1LCS6
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Position
I:619476..620705
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AA seq
409 aa
AA seq
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MRVLHTSDWHLGRPLFGQKRYEEFSAFLDWLARTLQEKEVDVLVVPGDIFDSGTPSNRAQ
RLYYDFLRQVYLSPCRHVVITAGNHDSPSMLGASREILQVLDIHVVGNLPEDPADEVKVL
RDAQGKVALIVCAVPFLRDADMRLVEEGESSGDKESKMQEAIRRHYAQVLEEAAALRDRL
APDVPLLCMGHLFTAGGQTVDGDGVRDLYVGSLAHVPASIFPPCIDYLALGHLHVPQRVG
GMEHMRYSGSPLPMGFGEASQPKSVCLVDFSGRSARVELLPVPEFQKLERVSGSMSEILS
RLAALRDSDSSAWLEVVYTGDDLEGSLRRQVETAVAGSGLRVLKIRNARLPDSQPRLDDT
GRNLEELGETEVFSRCLAARKIEGAQADLLMRLYGEILTAMHETDSNAE
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgtacttcatacatcggactggcatctgggccgcccgcttttcggccagaaacgc
tacgaggaattttcggctttcctggactggcttgcccgcacattgcaggaaaaagaggtg
gatgtcctggtcgtcccgggggatatcttcgatagcggcacgcccagcaacagggcccag
cgcctgtactatgactttttgcggcaggtctatctctcaccctgccgtcatgtggtcatc
actgccggcaatcacgattcgccgtccatgctgggggcttcacgcgagatattgcaggtc
ctggatatccatgtggtgggcaacctgcccgaagatcccgcggatgaggtcaaggtcctg
cgggatgcccagggcaaggtcgcgctcatcgtctgtgccgttcccttcctgcgtgatgcc
gacatgcgcctggtggaggaaggggagagcagcggcgacaaggaaagcaagatgcaggaa
gccatccgccggcattacgcgcaggtcctggaagaggcggcggcgctgcgggaccgtctg
gcgcctgatgtccccctgctttgtatggggcatctgttcactgccggcgggcagaccgtt
gacggcgatggcgtgcgtgatctttatgtgggctcgctggcgcatgtcccggcgtccatc
ttcccgccgtgcatcgattatctggccctggggcacctgcatgtgccccagcgggtggga
ggcatggagcatatgcgctacagcggctcgcccctgcctatgggctttggcgaagcctcg
cagcccaaaagcgtctgcctggtcgatttcagcgggcgctcggcccgtgtggaactgctg
cctgtgccggaattccagaagctggagcgggtgagcggttccatgagtgagatactcagc
cgtctggcagcgctccgggacagcgacagttccgcctggctggaagtggtctataccggt
gatgaccttgagggcagcctgcgccggcaggtggagacggctgtggccgggagcgggctg
cgcgtcctgaagatccgtaatgcgcgcctgccggacagccagccgaggctggacgatacg
ggcaggaaccttgaagagctgggcgagacagaagttttttcgcgctgccttgcagcccgg
aagatcgaaggggcccaggccgacctgctcatgcgcctgtacggagagatcctcaccgcc
atgcacgaaacagacagcaatgccgaatag
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