Desulfovibrio piger: DESPIGER_0611
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Entry
DESPIGER_0611 CDS
T04638
Name
(GenBank) SSU ribosomal protein S1p
KO
K02945
small subunit ribosomal protein S1
Organism
dpg
Desulfovibrio piger
Pathway
dpg03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
dpg00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
DESPIGER_0611
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
dpg03011
]
DESPIGER_0611
Ribosome [BR:
dpg03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
DESPIGER_0611
Bacteria
DESPIGER_0611
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
S1_RRP5
Spt6_S1
PCB_OB
RNase_II_C_S1
DUF2187
CsrA
Motif
Other DBs
NCBI-ProteinID:
SFV72495
UniProt:
A0A1K1LCS5
LinkDB
All DBs
Position
I:624842..626305
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AA seq
487 aa
AA seq
DB search
MTDEKNLSTFEEGSEDFAAMFAAQEAGTVRLQPGQKVTGTIITITGDSVFVDVGIKLDGI
MDRKDILDADGNESVAPGDSIEVYVVGTSAGEIRLSRSMSGAGMAALEDARDAGVPVDGR
VTGTCKGGYTVSVMGKNAFCPGSQMDSVSVTDAEALVGRTMQFLIIRVENRGRNIVVSRR
ALLDRERQENLEKVLASLNVGDTVEGRITRLASFGAFMELAPGVEGMIHLSELSWSRVNS
ADEAVAVGDVVRAKLLSVSKDDKGRTRISLSRKKAEGDPWLQVADRLTAGSVVEGKVVRI
APFGAFVELLPGVEGLVHLSEMSWTKRVNKAEDVVSVGDVISVKIKDINVESRRISLSLR
DAEGDPWQDADQRFAAGTVVTGTVESRSQFGLFVSLAPGITGLLPAGVIKNAKNSGEFSK
LDKGDSVTLVVQSVDTAARRISLAPEGMEEASAAEDKSWKQHTSSAPKDAGMSIMAQALQ
KALQNKR
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgactgacgaaaagaatctgtccaccttcgaagaaggcagcgaagacttcgccgccatg
ttcgcggcccaggaagccggcactgtgcgcctgcagcctggccagaaagtgacgggcacc
atcatcaccatcaccggcgactctgtctttgtggatgtgggcatcaagctggatggcatc
atggaccgcaaggacatcctcgatgccgacggcaacgaaagcgttgcccctggtgacagc
atcgaagtctatgtcgtgggtacctccgctggtgagatccgtctgtcccgctccatgagt
ggcgccggcatggctgccctggaagacgcccgcgacgccggtgtgcccgtggacggccgc
gtgaccggtacctgcaagggcggctacactgtcagtgtgatgggcaagaacgccttctgt
cccggcagccagatggacagcgtgagcgtgaccgacgccgaagccctggtgggccgtacc
atgcagttcctcatcatccgtgtggaaaaccgcggccgcaacatcgtggtctcccgacgt
gccctgctggatcgtgagcgtcaggaaaatctggaaaaggtcctggcctccctcaatgtg
ggcgataccgtggaaggccgcatcacccgtctggcctcctttggtgccttcatggaactg
gcccccggcgtggaaggcatgatccacctctccgaactgtcctggtcccgcgtgaacagc
gctgacgaagcggtggccgtgggcgatgtggtgcgcgccaagcttctgtccgtcagcaag
gacgacaagggccgtacccgtatttccctgtcccgcaagaaggctgaaggtgatccctgg
cttcaggtcgccgaccgtctgaccgccggcagcgtggtggaaggaaaggtcgtgcgtatc
gctcccttcggtgctttcgtggaactgctgcctggcgtggaagggctggtgcacctttcc
gaaatgtcctggaccaagcgcgtgaacaaggccgaggacgtggtgagcgtgggcgacgtg
atctccgtcaagatcaaggatatcaacgtggaaagccgccgcatctccctgagcctgcgt
gacgccgaaggcgacccctggcaggatgccgaccagcgcttcgctgccggtaccgtggtg
acgggtacggtggaaagccgcagccagttcggcctgtttgtgagcctggcccccggcatc
accggcctgctgcccgccggcgtgatcaaaaatgccaagaacagcggtgaattctccaag
ctggacaagggtgacagcgtgaccctggtcgtgcagtccgtggatacggctgcccgtcgc
atcagcctggctcccgaaggtatggaagaggcttccgccgctgaagacaagtcctggaaa
cagcacaccagttccgctcccaaggatgccggcatgagcatcatggcacaggctttgcag
aaggctctgcaaaacaaacgctaa
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