Desulfovibrio piger: DESPIGER_1157
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Entry
DESPIGER_1157 CDS
T04638
Name
(GenBank) DNA double-strand break repair Rad50 ATPase
Organism
dpg
Desulfovibrio piger
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Gene cluster
GFIT
Motif
Pfam:
AAA_27
AAA_23
SMC_N
Cytadhesin_P30
Motif
Other DBs
NCBI-ProteinID:
SFV73009
UniProt:
A0A1K1LE56
LinkDB
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Position
I:1226862..1230812
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AA seq
1316 aa
AA seq
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MRLLSFHADGFGILARTGAEGLGPGINIFLGDNEAGKSTCLTFLRAMLTGYPSGRKERQA
GQPLRGGQAGGSLILEGGPHGLLHLHRRPGPGSGRLQLTGPDGSPVPESLLEQLFRGIDR
QVYRNVFGFSLGELQRFESLDDEAVRHALYGASFGTGLRSPADVLRALQQQADAIYRPQG
RKLPLNVQAGSWQELRARIRQADARSSRYDDLCARWQQRKQDLEGLRRRKTELETGLRRT
ERRLSVWEQWREWHLLGMRLERLSGLPQDFPPQGRERLARLREREEDNRRALQGLREQCA
RTRGQLRELCPDQALAAVLPRLRALTEQSATYRQALADLPLAHLRKEQLCRRLQEGLSRL
GPGWDCARIRAADRSVFGREALERQAATLATGTTALQMARRREDEAAAALAQAEETRQAQ
LQRLAALPHRQPPLDSDQQQRLQRLLESRQEKQDDLPRWQRRQQRAREAFCRACAPLHLD
ENDLAGPERLLRHRDEALSLSARLHRLEEELHSLRARQDRARREQEALQQREAALVPSID
HHPAPEQEALESFAAAVRQCRTLRAGIAAETVRQEGLAQQARQLARPLTGGSLPLLCMGI
VFLLSGLALLLAGHWAPELLPWPGPAAPPWTGGLAALCGLALLAGGMPHAGKEERRRREE
AERLRQLLEACSGRLREQQRRLAQLPLPRTVADDIPDADELEARLEKQQLLRRQLDQLLL
EHDSLRQELRSVRQTLARLAEQEQELLAAVQEGEKRWQAMLPAATAAAFAPAAAGLLFER
AATAATLAEALRTAGDDAGHAALSLQQTETAVRDLLALLPPDAACPDLPEAVRRALALCR
EVEEAGTRHQQAAAEATAGAGLLERCRKALEDSRCRTREAARKLETARTGWAAGLRSLGL
PEDLAPGTVHAALDGMDACLRLEAELQQEDSRLQRLHHDVEALRAPLAALLTELGRPVPP
QDADWLRHLDMLAEAAEEARHHAAEQARLRRLLAEQETACQRAENDLDGIRADLAALLRQ
GEARDDGAFLQTADLLEERHQAEQRRLLLEDSLRLVAGDQPLETFLAAFREEAREEEEQG
RDEQQRLLAELRQEEDALAEDVAALGVRVEAMQQDGTLADLLQQEAGQREELQRQARAWC
RLRLAHALLHRAKLAFEKERQPRVIRRAAAIFRDITAGAWQDVGAVVGDSGLRVMPPQGE
PVSPEQLSRGTQEQLYLALRLAYIQDHAAQAGPLPVIMDDVLVDFDPGRARRTARILGDF
SQGKYGVRQQLLFFTCHPHTAALLREMQPGAPFFLLDKGRIRPAGPEETPEGPSRP
NT seq
3951 nt
NT seq
+upstream
nt +downstream
nt
atgcgcctgctgtcattccatgcggacggtttcggcatcctcgcccgaacgggcgccgag
ggcctcggcccgggcatcaacatttttctgggcgacaacgaagccggcaaatccacctgt
ctgaccttcctgcgggccatgctcaccggctatccctccgggcgcaaggaacggcaggca
ggccagcccctgcgcggcggccaggccgggggcagcctgatactggaaggcggcccccac
ggcctgctgcacctgcatcgccgcccgggcccgggcagcggccgtttgcagctcaccggc
cctgacggctcccctgtgccggaaagcctgctggaacagctcttccggggcatcgaccgt
caggtctaccgcaatgtgttcggcttcagcctgggggaattgcagcgcttcgagagcctg
gacgacgaggccgtgcgtcacgccctctacggggccagcttcggcacgggcctgcgctcc
ccggccgatgtgctgcgtgcgttgcaacagcaggccgatgccatctatcgcccgcagggc
cgcaagctgcccctcaacgtccaggcggggagctggcaggagctgcgggcccgcatccgt
caggccgacgcccggagcagccgctacgatgacctgtgcgcccggtggcagcagcgcaaa
caggatctggagggcctccgccgccgcaagacggagctggagaccggcctgcgccgtacg
gagcggcgcctttccgtctgggaacagtggcgggagtggcatctgctggggatgcggctg
gagcgtctttccggcctgccgcaggatttcccgccgcagggacgcgagcgtctggcccgc
ctgcgggaacgggaggaggataaccggcgtgccctgcagggcctgcgggaacagtgcgcc
cggacgcgcggacagctccgggaactgtgcccggatcaggcccttgcggcggtcctgccc
cgcctgcgcgccctgacggaacagagcgccacctaccggcaggccctggccgacctgccg
ctggcacacctgcgcaaggaacagctctgccgccgtctgcaggaagggctttcccgtctg
ggccccggctgggactgcgcccgcatccgggccgcagaccgctctgtcttcggccgggag
gcgctggaacggcaggccgccacgctggcgaccggcacgacggccctgcagatggcccgc
cggcgggaagacgaggccgccgccgcgctggcacaggcggaggagacccgtcaggcgcag
ctgcaacgccttgcggccctgccccaccgccagccgcctctggacagcgaccagcagcaa
cgcctgcaacgcctgctggagagccggcaggaaaaacaggacgatctcccccgctggcaa
cggcggcagcaacgggcccgggaagccttttgccgcgcctgcgcgccgctgcacctggat
gaaaacgatcttgccgggccggagcggctgctccgccacagggacgaggccctgtccctg
tcggcccgcctgcacaggctggaagaggagctgcacagcctccgggcccgtcaggatcgc
gcacgccgggagcaggaggccctgcagcagcgcgaggcagcccttgtcccgtccatcgac
caccacccggccccggagcaggaggcccttgaaagctttgccgctgccgtgcggcagtgc
cgtacgctccgggccggcatcgccgccgagacggtccggcaggaaggcctggcccagcag
gcccggcagctggcacgtcccctgacaggcggcagcctgcccctgctctgcatgggcatc
gtcttcctgctctccggtctggccctcctgctggccgggcactgggccccggagctgctc
ccctggcccgggccggcggccccgccctggacaggcgggctggccgcgctctgcgggctc
gccctgctggcgggcggcatgccccatgccggaaaggaggaacgccgacgccgggaagaa
gcggaacgcctccggcagctgctggaagcctgttccggccgcctgcgggaacagcagcgc
cgccttgcccagctgcccctgccgcgcaccgtggccgatgacatcccggatgccgacgaa
ctggaagcccggctggaaaaacagcagctcctgcgccgccagctggaccagctcctgctg
gagcatgacagcctgcggcaggaactgagaagcgtcaggcaaacgctggcccgcctggcc
gaacaggagcaggagctcctcgccgccgtgcaggaaggggaaaaacgctggcaggccatg
ctgcccgcagccaccgcggcggcctttgcaccggcagcggcgggactgcttttcgaacgg
gcggccaccgccgccacgctggcggaggccctgcgcacggccggggacgatgccggacat
gcggccttgtccctgcagcagacggaaacagccgtgcgcgacctgctggccctgcttcct
cccgatgccgcctgccccgacctgccggaggccgtccgccgcgctcttgccctctgccgg
gaggtggaagaggccggcaccaggcatcagcaggcagccgccgaggccacggccggtgcc
gggctgctggaacgctgccgcaaggccctggaggacagccgctgccgcacgcgggaagcg
gcccgcaagctggagacggcccggacaggctgggcagcgggcctgcgctccctgggcctg
ccggaagatctggcccctggcaccgtccatgccgccctggacggcatggacgcctgtctg
cgccttgaggcggagctgcagcaggaggactcgcgcctgcaacgcctgcaccacgacgtg
gaggccctgcgggcaccgctggcggccctgctgacggagctggggcggcccgtgccgccg
caggacgccgactggctccggcacctggacatgctggccgaggcggcggaagaggcccgc
catcatgccgcggaacaggcccgcctgcgtcggctgctggctgagcaggaaacggcctgc
cagcgtgcggaaaacgatctggatggcatccgtgccgacctggcggccctgctgcgtcag
ggagaagcccgggacgacggcgcgttcctgcagacagcggacctgctggaagaacggcac
caggcggaacagcgccgcctgctgctggaggacagcctgcgcctggtggccggggaccag
ccgctggagacctttctggccgctttccgggaagaggcccgggaggaagaggaacagggc
cgcgacgagcagcagcgcctgctggcagaactgcggcaggaagaagacgcgctggcggaa
gatgtcgccgctctgggcgtgcgcgtggaggccatgcagcaggacggaaccctggccgac
ctgctgcagcaggaagccggccagcgggaggaactgcagcgccaggcccgcgcctggtgc
cgcctccgtctggcccacgccctgctccacagggcgaaactggccttcgagaaggaacgc
cagccccgtgtcatccgccgtgccgcggccatcttccgggacatcaccgcgggcgcctgg
caggacgtgggggccgtggtgggcgattccggcctgcgggtcatgccgccgcagggcgag
cccgtcagcccggaacagctgagccggggcacacaggagcagctctatctggccctgcgc
ctggcctatatccaggatcacgcggcacaggccggccccctgcccgtcatcatggacgat
gtgctggtggacttcgatcccggccgggcacggcgcacggcccgcatcctgggggacttc
agccaggggaaatacggtgtccggcagcagctgctcttcttcacctgccatccccatacg
gcggccctgctgcgcgagatgcagcccggcgcccccttcttcctcctggacaagggccgg
atccgccccgccgggccggaggagacgccagaagggccctcacgtccctga
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