Desulfovibrio piger: DESPIGER_1679
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Entry
DESPIGER_1679 CDS
T04638
Name
(GenBank) ATP-dependent DNA helicase UvrD/PcrA, proteobacterial paralog
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
dpg
Desulfovibrio piger
Pathway
dpg03420
Nucleotide excision repair
dpg03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dpg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
DESPIGER_1679
03430 Mismatch repair
DESPIGER_1679
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dpg03400
]
DESPIGER_1679
Enzymes [BR:
dpg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DESPIGER_1679
DNA repair and recombination proteins [BR:
dpg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DESPIGER_1679
MMR (mismatch excision repair)
Other MMR factors
DESPIGER_1679
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
AAA_12
Motif
Other DBs
NCBI-ProteinID:
SFV73515
UniProt:
A0A1K1LFP1
LinkDB
All DBs
Position
I:complement(1770247..1772610)
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AA seq
787 aa
AA seq
DB search
MIDYAHALNSAQYEAATCGDGPVLVVAGAGSGKTRTITYRLSWLADHGVPPESMLLLTFT
RKAAQEMLQRAAALSDHALSLVQGGTFHSFAFGVLRRYRPDWLEDRPFTVMDSADINAAV
KACKDELRLGKGDRSFPRTQAIVGFLSKARNKEMRLDEVLQREAFHLLPYAEPLMRLGEA
YDAYRKEKGLLDYDDLLFELEHLLRTNERAAGNLRRRYTHILVDEYQDTNLVQARIVRLL
AGPEGEGLPPGNVMAVGDEAQSIYAFRGANVRNILDFPKLFPGARIIRLEENYRSTRPIL
DVANNLLEHATESFRKKLFTRREGGAPVRLVTPLSDMSQARLVVRRIEDLLTRHLPHEIA
VLFRAGFHSYHLEMALNQAGIAFRKYGGLRYTEAAHVKDVMAYARLLLNPLDMPAFSRVA
ELHEGIGPKTVLKLYNVAQSADGPALDKACARFPSFREDLRFIAEMRARPLHPVTALELI
VDHYRPVLESRYPEDWPRRQQGLEEILQMASGYNDLDLFLADLALDSPDEEDEDNEGRIT
LSTVHSAKGLEWNAVLIIDLVEDRFPSRHALARPEDFEEERRLMYVACTRARQELDLYSP
ATIYSKAEQGTQHVAQSPFVRELPAGLTEEWVESYGGGLSKRARGGMSADPFAGRAAPSG
PGAGFGRGRHTGLAAPAGLSPARRLAATRALQDADDCQLPPDERPGGAAGSGRPAASAPA
APAGEAAGGSVLAAAGAVAAGRRPCFCRHKIFGRGKILGLMPPNKVQVNFAGFGVKVILA
DYLQLED
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atgattgattacgcgcacgcgctcaacagcgcccagtacgaggccgccacctgcggcgac
gggccggtcctggtcgtggccggtgccggttccggcaagacccgcaccatcacctaccgc
ctgtcctggctggcggatcacggtgtcccgccggaatccatgctgctgctcaccttcacc
cgcaaggcggcgcaggagatgctgcaacgggccgcggccctgtccgaccatgccctgagc
ctggtgcaggggggcaccttccattccttcgccttcggcgtgctgcgccgttaccggccc
gactggctggaggaccgccccttcacggtcatggacagcgcggacatcaacgcggcggtc
aaggcctgcaaggacgagctccggctgggcaagggggaccgttccttcccgcgcacccag
gccatcgtgggctttttgagcaaggcccggaacaaggagatgcgcctggacgaggtcctg
cagcgcgaggccttccacctgctgccctatgccgagccgctgatgcggctgggcgaggcc
tacgatgcctaccgcaaggaaaagggcctgctggactacgacgacctgctgttcgagctg
gagcatctgctgcgcaccaacgaacgcgcggccgggaacctgcgccgccgctacacgcac
atcctggtggacgaatatcaggacaccaacctggtgcaggcccgcatcgtgcgtctgctg
gccgggccggagggcgaaggcctgccgccgggcaacgtcatggccgtgggcgacgaggcc
cagtccatctatgccttccggggcgccaatgtgcgcaacatcctcgatttccccaagctt
ttccccggggcccgcatcatccggctggaggagaactaccgctccaccaggcccatcctg
gacgtggccaacaacctgctggaacacgccacggaatcgttccgcaaaaaactgttcacc
cgcagggagggcggcgcgccggtgcgcctggtgacgcccctcagcgacatgagccaggcc
aggctggtggtgcgccgcatcgaggacctgctgacccggcacctgccgcacgagatcgcc
gtgctcttccgggcgggtttccattcctaccatctggagatggccctcaaccaggcgggc
atcgccttccgcaagtacggcggcctgcgctacaccgaggcggcccacgtcaaggacgtc
atggcctacgcccgcctgctgctcaacccgctggacatgcccgccttctcgcgcgtggcc
gagctgcacgagggcatcggccccaagaccgtgctcaagctctacaacgtggcccagagc
gccgacggtccggccctggacaaggcctgcgcccgcttcccctccttccgcgaggacctg
cgcttcatcgccgagatgcgcgcccgcccgctgcatccggtgacggcgctggagctcatc
gtggaccattaccgccccgtgctggagagccgctatcccgaagactggccccgccgccag
cagggcctggaagagatcctgcagatggcctcgggctacaacgaccttgatctgttcctg
gccgacctggccctggactcccccgacgaggaagacgaggacaacgagggccgcatcacc
ctttccacggtgcactcggccaagggcctggagtggaacgccgtgctgatcatcgacctg
gtggaggaccgcttcccctcgcgccacgctctggcgcgccccgaggactttgaagaggaa
cgccgcctgatgtacgtggcctgcacccgcgcccggcaggagctggacctgtattcgccg
gccaccatctacagcaaggccgagcaaggcacgcagcatgtggcccagagcccctttgtg
cgcgagctgcccgccggtctgaccgaagagtgggtggaaagttacggcggcggcctgagc
aaacgggcgcgcggcggcatgtccgccgatcccttcgccgggcgtgcggccccgtccggc
cccggcgcgggcttcgggcgcggccgccatacgggccttgccgcccctgccgggctgagc
ccggcccggcgtctggccgccacccgcgccctgcaggatgccgatgactgccagctgccc
ccggacgaacggccgggaggcgctgcgggcagcgggcgccctgccgcgtccgcccctgcc
gctcccgccggtgaggctgccggaggttcggtgctggcggccgccggggccgtggccgcg
ggcaggcggccctgcttctgccgccacaagatcttcggccggggcaagatcctcggcctc
atgcccccgaacaaggtgcaggtgaactttgccggtttcggggtcaaggtcatcctggcc
gactatctgcaactggaggactga
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