Desulfovibrio piger: DESPIGER_1708
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Entry
DESPIGER_1708 CDS
T04638
Name
(GenBank) A/G-specific adenine glycosylase
KO
K03575
A/G-specific adenine glycosylase [EC:
3.2.2.31
]
Organism
dpg
Desulfovibrio piger
Pathway
dpg03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
dpg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
DESPIGER_1708
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dpg03400
]
DESPIGER_1708
Enzymes [BR:
dpg01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.31 adenine glycosylase
DESPIGER_1708
DNA repair and recombination proteins [BR:
dpg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
DESPIGER_1708
Prokaryotic type
DESPIGER_1708
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX_4
NUDIX
HhH-GPD
HHH
EndIII_4Fe-2S
Nudt16-like
DUF6480
Motif
Other DBs
NCBI-ProteinID:
SFV73544
UniProt:
A0A1K1LFS4
LinkDB
All DBs
Position
I:1800987..1802309
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AA seq
440 aa
AA seq
DB search
MRRPCNTAAIRLYTTSGRQRQCASSLLRRGDRKGPHGYTAAMRSRQTTGQHALPSLVPVT
GAVPPPGHRPPESHLPELQQALLAWFAANARPLPWRRQYTPYEVWISEIMLQQTQMERGV
SYFLRWMERFPDLPALAAASEEEVLHAWEGLGYYSRARNLLAAARLVMREHGGIFPSGPD
AIRALPGIGPYTAAAIASIAFNLPVACIDANVERVIARVFDVDSPVKSGPAAARIAELAR
RLLPAGEARRHNQAMMELGALVCGKKPRCGQCPLARFCTALHLGIVHERPVPGKKAEITP
IEVVTGVLSSHGRIFVQKRLPRGAWGGLWEFPGGRVEPGETPEQAVVREFAEETGLAVRV
TAPLGVIRHGYTTYRVRLHCFALEPVTDATPRPPEPPVLTAATACRWLERGELESLAMPA
AHRKLADSLTAPQGALLAAF
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
ttgcggcggccgtgcaacacggcggccatccgtctctatacgacaagcggccggcaaaga
caatgtgcctcctccctgctccggcggggtgacaggaagggcccgcacggctacactgcg
gccatgagatcccgccagaccaccggccagcatgcgctgccgtccctcgtccccgtcacc
ggtgccgtgccgccgcccggccaccgcccgcccgagagccatcttcccgagctgcagcag
gccctgctcgcctggttcgccgccaatgcccggcccctgccctggcggcgccagtatacg
ccctatgaagtctggatctcggagatcatgctccagcagacccagatggaacgcggcgtc
agctattttttgcgctggatggagcgctttcccgacctgcccgccctggccgccgcttcc
gaggaggaagtgctgcacgcctgggagggcctgggctactattcccgcgcccgcaacctg
ctggccgccgcccgcctggtcatgcgggagcacggcggcatcttcccctccgggcccgat
gccatccgcgccctgcccggcatcggcccctacaccgcggccgccatcgccagcatcgcc
ttcaacctgcccgtggcctgcatcgacgccaatgtggaacgggtcatcgcccgcgtcttc
gacgtggacagcccggtcaagtccggcccggcagccgcgcgcatcgcggagctggcccgc
cgcctcctgcccgcgggcgaggcacgccgccacaaccaggccatgatggaactgggcgcc
ctggtctgcggcaagaagccccgctgcggccagtgccccctggcccgtttttgcacggcc
ctgcacctgggcatcgtgcatgagcgccccgtcccgggcaaaaaggcggagatcaccccc
atcgaggtggtgaccggcgtcctttccagccacggccgcatcttcgtccagaaacgcctg
ccccggggggcctggggcggcctgtgggaattccccggcggccgtgtggagcccggcgag
acgccggaacaggccgtggtgcgcgaattcgccgaggagacgggcctcgccgtccgggtg
acggccccgctgggcgtcatccgccacggctacaccacctaccgggtgcgcctgcactgc
tttgccctggagccggtcacggacgcaacgccccggccgcccgaaccgcccgtgctcacg
gcggccacggcctgccgctggctggagcgcggggagctggagagcctggccatgcccgcc
gcccatcgcaagctggccgacagcctcacggcgccgcagggggcgctgctggcggctttt
tga
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