Desulfovibrio piger: DESPIGER_1836
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Entry
DESPIGER_1836 CDS
T04638
Name
(GenBank) 3'->5' exoribonuclease Bsu YhaM
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
dpg
Desulfovibrio piger
Brite
KEGG Orthology (KO) [BR:
dpg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dpg03019
]
DESPIGER_1836
Messenger RNA biogenesis [BR:
dpg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
DESPIGER_1836
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GFIT
Motif
Pfam:
HD
TraI_2
tRNA_anti-codon
Cas3_HD
HDOD
Motif
Other DBs
NCBI-ProteinID:
SFV73665
UniProt:
A0A1K1LG22
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All DBs
Position
I:complement(1952438..1953496)
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AA seq
352 aa
AA seq
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MAAESGYMQKGIFVKDMTAPNEAEGIFVITLAAQGSSRNGPYWRLVLADASGSVEAKIWS
PLSASFPVLRTGVFFYAHGRVSTFRDQLQFTVEEGRLLTPEEGAALDLADFMPASPYPLD
AMMDELMALVREEFRHKPWRRLVDGVFKNEALREAFRTCPAAKGVHHAYAGGLLEHTLGV
FKLCRRLADQYPELDRQTLLAGALFHDFGKIREFSGGIANDYTDEGRLLGHLEICVEMLA
PYLEKSGLEPELQRHLKHLVLSHHGTLEFGAVRVPQTAEALALHYADNIDAKMAQCRGLF
AQLGEGESWTPYQATLGRAMHRCARTPVEEKVEKKSRASRKNPGDDGMLSLL
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
gtggccgcagagtcaggatatatgcaaaaaggcatcttcgtcaaagacatgacggccccc
aacgaggcggagggcatcttcgtcatcaccctggccgcgcagggcagctcgcgcaacgga
ccttactggcggctcgtgctggccgacgccagcggcagcgtggaggccaagatctggtcg
cccctgagcgcctcttttcccgtcctgcgcacgggcgtcttcttctacgcccacggccgg
gtgagcaccttccgcgaccagctccagttcacggtggaggaaggccgcctgctcacgccg
gaagaaggcgccgccctggacctggccgacttcatgcccgccagcccctacccgctggat
gccatgatggacgagctcatggccctggtccgcgaggagttccgccacaagccctggcgc
aggctggtggacggcgtgttcaaaaatgaggcgctgcgcgaggccttccgcacctgcccg
gcggccaagggcgtgcaccacgcctacgcgggcggcctgctggaacataccctgggcgtc
ttcaagctctgccgccgcctggccgaccagtatcccgagctggaccgccagaccctgctg
gccggggccctgttccacgacttcggcaagatccgcgaattttccggcggcatcgccaac
gattataccgacgagggccgcctgctggggcacctggagatctgcgtggagatgctggcc
ccctatctggaaaagtcggggctggagcccgaattgcagcgccatctcaagcatctggtg
ctgagccaccacggcacgctggagttcggggccgtgcgcgtgccgcagaccgccgaggcc
ctggcgctgcactatgcggacaacatcgacgctaagatggcccagtgccggggcctgttc
gcccagctgggcgaaggcgagagctggacgccctatcaggccactctgggccgggccatg
caccgctgcgcgcggacgccggtggaagaaaaagtcgaaaagaagtcccgcgcttcccgg
aaaaatcccggggatgacgggatgctctccctgctgtga
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