Desulfovibrio piger: DESPIGER_1912
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Entry
DESPIGER_1912 CDS
T04638
Name
(GenBank) Ribosomal protein S12p Asp88 (E. coli) methylthiotransferase
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
dpg
Desulfovibrio piger
Brite
KEGG Orthology (KO) [BR:
dpg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dpg03009
]
DESPIGER_1912
Enzymes [BR:
dpg01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
DESPIGER_1912
Ribosome biogenesis [BR:
dpg03009
]
Prokaryotic type
ribosomal protein modification factors
DESPIGER_1912
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
Motif
Other DBs
NCBI-ProteinID:
SFV73741
UniProt:
A0A1K1LGA1
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All DBs
Position
I:2043715..2045079
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AA seq
454 aa
AA seq
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MTVHSFSSAAGAAAPLTRARASGSLPVWSLSLGCPKNRVDTEHLLGSLGMPVRSVEHMGR
ARLVFINTCGFIEPAVRESIRSVLDAVERLGRCKRRPLLAVAGCMVGRYGVRDLAADLPE
VDLWLPTSELEHWPGMVREALGLPAAPAAPGRLLSTGPSYAWLKVGEGCRHKCAFCTIPS
IRGPLRSVPAADLREEARGLLAGGVRELVLVAQDLTSWGSDFDTPQSLPRLLDELLPLDR
LTWLRLLYLYPSGVTPELLRYMREAGPQLLPYFDIPLQHAHPEVLTRMGRPFAHDPRRVV
DRVREALPGAALRTTFIVGYPGETEEHFQALCRFVEETRFRHLGVFAYQAEEGTPAAAMP
DQVPVEVREERRAALMEIQAGISEQQLQEVVGRTMPVLVDAPHDEWPGLHVGRVWFQAPE
VDGITYVSGPGVAPGALVQGDIVESSTYDLTALA
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtccattccttttcttccgcagccggagcggccgcgcccctgacgcgcgcccgt
gcgtccggctctttgccggtgtggtccctgagcctgggctgtcccaagaaccgtgtggat
accgagcatctgctgggctcgctgggcatgcccgtgcgcagcgtggaacacatgggccgg
gcacgcctggtcttcatcaatacctgcggtttcatcgaacctgccgtgcgcgagtccatc
cgctccgtcctcgatgccgtggagcgcctgggccgctgcaagcgccgccccctgctggcc
gtggccggctgcatggtggggcgctacggcgtcagggatctggccgccgacctgcccgag
gtggacctgtggctgcccaccagcgagctggagcactggcccggcatggtgcgcgaggcc
ctgggcctgcccgccgcgcccgcggcgccgggccgcctgctctccacgggcccgtcctat
gcctggctcaaggtgggcgagggctgccgccacaagtgcgccttctgcaccatcccttcc
atcaggggcccgctgcgctcggtgcccgccgccgacctgcgcgaggaggcccgcggcctg
ctggccggcggggtgcgcgaactggtcctggtggcccaggacctgacctcgtggggcagc
gacttcgacacgccccagagcctgccccgactgctggacgagctgctgcccctggaccgc
ctgacctggctgcgcctgctctacctctaccccagcggcgtcacgcccgaactgctgcgc
tacatgcgcgaggccgggccgcagctgctgccctacttcgacatccccctgcagcacgcc
catcccgaggtgctgacccgcatgggccgccccttcgcccatgatccccgccgcgtggtg
gaccgcgtgcgcgaggccctgcccggggccgccctgcgcactaccttcatcgtgggctat
cccggcgagaccgaggaacatttccaggccctgtgccgtttcgtggaggagacacgcttc
cgccatctgggggtcttcgcctatcaggccgaggagggcacgcccgcggcggccatgccc
gaccaggtgcccgtggaagtacgcgaggaacgccgcgccgcgctcatggagatacaggcc
ggcatcagcgagcagcagttgcaggaagtggtgggccggaccatgccggtgctggtggac
gcgccccatgacgaatggccgggcctgcatgtgggccgcgtctggttccaggcgcccgaa
gtggacggcatcacctatgtgagcggcccgggtgtggcccccggtgcgctggtgcagggc
gacatcgtggagagcagcacctacgatctgacagccctggcctga
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