Desulfovibrio piger: DESPIGER_2048
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Entry
DESPIGER_2048 CDS
T04638
Name
(GenBank) RNA methyltransferase, TrmA family
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
dpg
Desulfovibrio piger
Brite
KEGG Orthology (KO) [BR:
dpg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dpg03009
]
DESPIGER_2048
Enzymes [BR:
dpg01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
DESPIGER_2048
Ribosome biogenesis [BR:
dpg03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
DESPIGER_2048
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_15
Cons_hypoth95
Methyltransf_31
Methyltransf_25
MTS
Motif
Other DBs
NCBI-ProteinID:
SFV73872
UniProt:
A0A1K1LGQ2
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All DBs
Position
I:complement(2186059..2187597)
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AA seq
512 aa
AA seq
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MTDEIVCRIDALAHDGRGLHRPEDGGPVIFVAGSLPGQTVRARIIRRQKRFWEARRTAVL
EDVALAADICPHGEDCGGCPWQRLPYAAQLRWKGQLVRDALERIGGLGRDAALPLRPALG
SPEQRAFRNKMEFAFGPADGSGLCLGLRRRGGLQVLPVPGCALLPAEGPGLVTACAGLAA
RSGLPAYVPPRSAAEEGRLRPRTDKGRGRRPRRERPGAEECGFWRFLVVRCGWPDPAPAQ
AAAADAPGRRWWLTCVTSPGTAEQRRTVARMGRELLDAFPCVQAFVHEERATPDALVAGE
RRVLCLDRRGEALPGDEAPLYLPLGGRWFGLDPASFFQVNGLAAERLAATAVEQLLSPRP
GAAPRRLLDVYCGAGAPGLLAAGHFDEVLGMEYDRRAVLLAERNARRFGFGHCRYEAGDA
ARLLTALAREHGPGHWDHALLDPPRGGVAPEALAALRHLAPERLVYISCNPATLARDARA
LSADYELMQVTPLDLFPHSPHVESVSCWQRRT
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacgagatcgtttgccgcatcgacgccctggcccacgacggccgcggcctgcac
cgccccgaggacggagggcccgtcatcttcgtcgcgggctccctgcccggccagacggtg
cgggcccgcatcatccgccgccagaaacgcttctgggaggcccggcgcacggcggtgctg
gaggatgtggccctggcggcggacatctgcccccacggcgaggattgcggcggctgcccc
tggcagcgcctgccctatgcggcccagctgcgctggaaaggccagctggtgcgcgatgcc
ctggagcgcatcggcggcctgggccgggatgccgccctgcccctgcggcccgccctgggc
tccccggaacagcgggccttccgcaacaagatggaattcgccttcggccctgccgacggc
agcggcctgtgcctgggcctgcgccggcgcggcggcctgcaggtgctgccggtgcccggc
tgcgccctgctgcccgctgaggggccgggactggtcacggcctgcgccggtctggccgcc
cgcagcggcctgcccgcctatgtgccgccgcgcagcgccgccgaggaaggccgcctgcgc
ccccggacggacaagggacgcggacgccgcccccggcgggaacgccccggtgcggaggag
tgcggcttctggcgcttcctggtggtgcgctgcggctggcccgatcccgctccggcacag
gccgccgcggccgatgccccgggacgccgctggtggctcacctgcgtcaccagccccggc
acggcggaacagcgccgcacggtggcccgcatgggccgggaactgctggatgccttcccc
tgcgtccaggccttcgtccatgaggaacgcgccacccctgacgccctggtggccggggag
cggcgcgtgctctgcctcgaccggcggggcgaggccctgccgggcgacgaagccccgctg
tatctgcccctgggcggccgctggttcggcctcgatcccgcttcctttttccaggtcaac
ggcctggccgccgaacggctggccgccacggccgtggagcagctcctctccccccggccg
ggcgcggcgccccgccgcctgctggacgtctattgcggcgccggagctccgggcctgctg
gcagcgggacatttcgacgaggtgctgggcatggaatacgaccgccgcgccgtgctcctg
gcggaacgcaatgcccgccgtttcggcttcggccactgccgctacgaggccggggacgcc
gcccgcctgctgacggccctggcccgcgagcacggccccggccactgggatcatgccctg
ctggacccgccgcgcggcggtgtggccccggaagccctggcggccctgcgccatctggcg
ccggaacgcctggtctacatctcctgcaacccggccaccctggcccgcgatgcccgggcc
ctctccgccgactatgaactgatgcaggtgacgcccctggacctcttcccccacagcccg
catgtggaaagcgtgagctgctggcagcgccgcacctga
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