Desulfovibrio piger: DESPIGER_2162
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Entry
DESPIGER_2162 CDS
T04638
Name
(GenBank) tRNA nucleotidyltransferase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
dpg
Desulfovibrio piger
Pathway
dpg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dpg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DESPIGER_2162
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dpg03019
]
DESPIGER_2162
Enzymes [BR:
dpg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
DESPIGER_2162
Messenger RNA biogenesis [BR:
dpg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
DESPIGER_2162
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
PolyA_pol_RNAbd
tRNA_NucTran2_2
MIOX
Motif
Other DBs
NCBI-ProteinID:
SFV73984
UniProt:
A0A1K1LH12
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All DBs
Position
I:complement(2312155..2313489)
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AA seq
444 aa
AA seq
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MEKALKDAITICKTLLRNGYDAHVINAPVQEHLLKHSKQLAVDIACEPDLETLLKLFPEA
RVEPDQRAIAQMEKDGVLFRFYALEVEDASHPELSLLRITPTMASMMDPQERLQLRMTGF
GSPAPTGDVYDGFMDVKGGLIQLTGLPDETLRHNYLLAIRALRFAANFDIPIEPNTWLAI
VRSSTRVLDYVPAADIMDEWRKVAAESMYRFVKLMFDAHILQGLIPEVAALACIRQRRND
DEDTEETVFDHTLECMRHYPEEGFHYDWLGTMAMLFHDVGKLFTGEYFDGQWTFYQHHRV
GAKVTRKILRRLHFSPEDIDLLCHLVRYHMRFHFMLTDRGIRRFKALDEYPRLIAMSRAD
IQARDGSYTYFNHNMKYLERAETPEQMLEPLLNGNEIMSETRLAPGPLVGVIRDALLQAQ
IAGEVTDRASALHFVCEYARKSVG
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaagcgctgaaagacgccatcaccatctgcaaaaccctgctgcgcaacggctat
gacgcccatgtcatcaatgcgcccgtgcaggaacatcttttgaagcacagcaaacagctg
gctgtggacatcgcctgtgagcccgacctcgagacgcttctcaagctcttccccgaagcc
cgcgtcgagccggaccagcgtgccatcgcccagatggaaaaagacggcgtgcttttccgt
ttctatgccctggaagtggaggatgccagccatcccgagctttccctgctgcgcatcacc
cccaccatggccagcatgatggatccccaggagcgcctgcagctgcgcatgaccggcttc
ggcagcccggcccccaccggcgatgtctatgacggcttcatggacgtcaagggcggcctc
atccagctcaccggcctgccggacgagaccctgcgccacaactacctgctggccatccgc
gccctgcgcttcgccgccaacttcgacatccccatcgagcccaacacctggctggccatc
gtgcgctcgtccacccgcgtgctggactacgtgcccgccgccgacatcatggacgaatgg
cgcaaggtggccgccgagtccatgtaccgcttcgtgaagctcatgttcgatgcccacatc
ctccagggcctcatccccgaagtggcggccctggcctgcatccgccagcgccgcaacgat
gacgaggacaccgaggagacggtcttcgaccataccctggagtgcatgcgccactacccc
gaggaaggcttccactatgactggctgggcaccatggccatgctcttccatgatgtgggc
aagctcttcaccggcgaatacttcgacggccagtggaccttctaccagcaccaccgcgtg
ggcgccaaggtcacccgcaagatcctgcgccgcctgcacttcagccccgaggacatcgac
ctgctctgccatctggtgcgctaccacatgcgcttccacttcatgctcacggaccgcggc
atccgccgtttcaaggccctggacgagtacccgcgcctcatcgccatgtcccgtgccgac
atccaggcccgcgacggcagctacacctacttcaaccacaacatgaagtacctggagcgt
gccgagacccccgaacagatgctggagcccctgctcaacggcaacgagatcatgagcgag
accaggctggcccccggcccgctggtgggcgtcatccgcgatgccctgctccaggcccag
atcgcgggcgaagtcacggaccgcgcctcggccctgcacttcgtgtgcgagtacgcccgc
aagtccgtgggctag
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