Deinococcus psychrotolerans: EHF33_05635
Help
Entry
EHF33_05635 CDS
T07550
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
dph
Deinococcus psychrotolerans
Pathway
dph03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dph00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EHF33_05635 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dph03019
]
EHF33_05635 (rny)
Messenger RNA biogenesis [BR:
dph03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
EHF33_05635 (rny)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
KH_2
Lectin_N
Motif
Other DBs
NCBI-ProteinID:
AZI42297
UniProt:
A0A3G8YDI9
LinkDB
All DBs
Position
1:complement(1149386..1151077)
Genome browser
AA seq
563 aa
AA seq
DB search
MTLMYVILGVLVGLFGGYVIGFPRGRQQRQALDNSAVQEAKVEAERVRSATLAETGRLRQ
DAEAEAARSRQDAERQRSDASKDASKLVQDASDRAAQMVAQATTQRDQLIQDAARERESL
KVERADTRREREDLGREIERLNRRAEQLDARGDKLDQHEERLEHHQQRLDADEAALQDKI
RHAELKLYEVAGLSEEQAREQILTHLDAELEEEKAIRVKAMTERASLDAKRTARHVIAQA
IQRSASETSAAMSVSVVPIPSDAMKGRIIGREGRNIRAFESLTGVDLIIDDTPEAVILSS
FNPVRREVAKHVLEGLVQDGRIHPTRIEEMVHKAQDEMKAFIHTQGEEAAIEAGVVGLKP
GIMQLLGRMYFRTSYGQNVLKHSVQVAHLTGIMAAELGLDAALARRAGLMHDVGKSIDRE
IEGTHVEIGVNLGRRFSEPLEVIDAIAHHHDPENGETLYSVLVAAADAISAARPGARREE
LESYIKRLEALEQIAVSFPGVNSAYAIQAGREVRVIVEPDRVSDAQAVLLAREIAGRVEQ
DMEYPGQVQVTVVRELRATEYAK
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atgaccttgatgtatgtcattctcggtgtcttggtgggtttgtttggcggctacgtgatt
ggatttccgcgtggtcggcagcagcgtcaggcgcttgataacagcgccgtgcaagaagcc
aaggtagaggccgagcgcgttcgcagcgcgacactggccgaaaccggacgcctgcgccaa
gacgccgaggccgaggccgcccgcagccgacaagacgccgagcgccagcgcagcgacgcc
agcaaagacgccagcaaactcgttcaagacgcctctgaccgcgccgcgcagatggtggct
caggccacgacccagcgcgatcaactcattcaggacgccgcccgcgagcgtgaaagcctc
aaagtcgagcgggccgacacccgccgcgagcgcgaggacttgggccgcgaaatcgagcgg
ctcaaccgccgcgccgagcaactcgacgcacgcggcgacaaactcgatcagcacgaagag
cggctcgaacaccaccagcagcgcctcgacgccgacgaagcggccctccaagacaaaatc
aggcacgccgagctcaagctctacgaggtcgcgggtctcagcgaggagcaggccagagag
caaattctcacgcacctcgacgcagagttggaagaagaaaaagccatccgggtcaaggcc
atgaccgagcgggccagcttggacgccaagcgcaccgcccgccacgtcatcgcgcaggcc
attcagcgcagcgcctccgagacttcggcggccatgagcgtcagtgtggtgccgattccg
tcagacgccatgaagggccgcatcatcgggcgcgaaggacgcaatattcgcgcctttgaa
agtctgaccggcgtagacctgatcattgacgacacccccgaagcggtgattctcagttcg
ttcaacccggtgcgccgcgaagtcgccaagcacgtcctcgaaggcttggtgcaagacggg
cggattcacccgacccgtattgaagagatggtgcataaagctcaagatgaaatgaaagcc
tttattcacacccaaggcgaagaagcggccatcgaagcgggtgtggtcggcctcaagccc
ggcatcatgcagctgctcgggcggatgtatttccgcaccagttatggccagaatgtgctg
aagcactcggtgcaggtggcgcacctgaccggcatcatggctgccgagctgggcttagac
gcggccctggcccgccgcgccggactgatgcacgatgtgggcaaaagcatcgaccgcgag
atcgagggcacccacgtcgagatcggcgtcaacttgggtcgccgattctcggagcctttg
gaagtcatcgacgcgattgcccaccaccacgacccggaaaacggcgagacgctttattcg
gtgctcgtcgccgccgccgacgccatcagcgcggcccggcccggtgcgaggcgcgaggag
ttggagagctacatcaagcggcttgaagccttggagcagatcgccgtgtcgtttcccgga
gtcaattccgcctacgccattcaagctgggcgtgaggtgcgcgtgatcgtcgaaccagac
cgcgtgtcggatgcccaagccgtcttgctggcccgcgagattgccgggcgggtcgagcag
gatatggaatatccaggtcaagttcaggtgacggtggtcagagaattgcgggccactgag
tacgccaaataa
DBGET
integrated database retrieval system