Deinococcus psychrotolerans: EHF33_05795
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Entry
EHF33_05795 CDS
T07550
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
dph
Deinococcus psychrotolerans
Pathway
dph02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
dph00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
EHF33_05795 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dph03021
]
EHF33_05795 (rpoD)
Transcription machinery [BR:
dph03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
EHF33_05795 (rpoD)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r1_1
ARA70
Motif
Other DBs
NCBI-ProteinID:
AZI43807
UniProt:
A0A3G8YHW0
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All DBs
Position
1:1186037..1187221
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AA seq
394 aa
AA seq
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MQELLKTGKVAGTLTAEEIATALTTALEAGGLDPETADAFEDLQLYIQSQHIEIQDLDED
EEEEDAEGEEKEKEEADDEEKYFDDMPRAVSNDPVRQYLHEIGRVPLLTLEEEIALARRI
EEGEEARKSHEEEPELEERAQRRLKRQMEDGAAARQGLIEANLRLVVSIAKKYTGRGLGF
LDLIQEGNQGLIRAVEKFEYRRRYKFSTYATWWIRQAINRAIADQARTIRIPVHMVETIN
KLTRTARQLQQELSREPTYEEIAEAMGPGWDAPKVEEVQKVSQEPVSLETPIGDEKDSFY
GDFIPDENLDSPVENAAKTLLSEELEKALGKLTEREAMVLKFRKGLVDGREHTLEEVGQR
FNVTRERIRQIENKALRKLKYHESRTRKLRDFLD
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
attcaggagttgctcaaaaccggcaaagtggcgggcacgctgacggcggaagaaattgcc
accgccctgaccaccgctctggaagcgggcggcctcgaccccgaaaccgccgacgccttt
gaagatttgcagctctacatccagagccaacacatcgaaattcaagacctcgacgaagac
gaggaagaagaagacgccgagggcgaggaaaaggaaaaagaggaagctgacgacgaagag
aaatacttcgacgacatgccccgcgccgtcagcaatgacccggtacgccagtacctgcac
gaaattggccgggttccgctgctgaccttggaagaagaaattgcgctggcccgccgcatc
gaagaaggggaggaagcccgcaaatcgcacgaggaagagccggaactcgaagaacgtgcc
cagcgccgcctcaagcgccagatggaagacggcgcggcggcccgccagggcttgatcgaa
gccaacttgcgcctggtggtcagcatcgccaagaagtacaccgggcgcggtctgggtttc
ctcgatttgattcaggaaggcaaccagggcctgatccgggcggtggagaagttcgagtac
cgccgccgctacaagttctctacctacgcgacgtggtggattcggcaggccatcaacagg
gccatcgccgaccaggcccgcaccatccgcattccggtgcacatggtcgaaaccatcaac
aagctgacccgcacggccaggcagcttcagcaagaactcagccgcgaacccacttacgaa
gaaatcgccgaggcgatggggccgggctgggacgcgcccaaagtcgaagaagtccagaag
gtctctcaagaaccagtgtcactggaaacgccgattggcgacgagaaagacagcttttac
ggcgacttcattcccgacgaaaacctggacagcccagtcgagaacgccgccaagaccctg
ctttccgaggaactcgaaaaagcgctgggcaaactgaccgagcgcgaggcgatggtgctc
aaattccgcaagggcctggtggacgggcgcgagcatacgctcgaagaagtcggccagcgc
tttaacgtcacccgtgaacgcattcgccagattgaaaacaaggcgctgcgtaagctcaag
taccacgagagtcgcacccgcaagctgcgcgactttttggactga
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