Deinococcus psychrotolerans: EHF33_10460
Help
Entry
EHF33_10460 CDS
T07550
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
dph
Deinococcus psychrotolerans
Pathway
dph03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dph00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EHF33_10460
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dph03019
]
EHF33_10460
Enzymes [BR:
dph01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
EHF33_10460
Messenger RNA biogenesis [BR:
dph03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
EHF33_10460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
P-loop_SecA
Flavi_DEAD
AAA_22
NgoMIV_restric
Cas3-like_C_2
eIF-3_zeta
Motif
Other DBs
NCBI-ProteinID:
AZI43917
UniProt:
A0A3G8YI66
LinkDB
All DBs
Position
1:complement(2117192..2118559)
Genome browser
AA seq
455 aa
AA seq
DB search
MQLPAPLREAIDALKYTVPTEIQGLALPPARMGKDVLGTAATGSGKTVAFLLPVIERLLT
QRARGTRALVLAPTRELAAQIEEVARFLIANTHLKVVSIFGGVSQGPQQKALRAGTDIVI
ATPGRLLDHIGQGNINFSALEVLVLDEADRMLDLGFLPDIRRVLRVLPDKRQTLLFSATM
PDSILKLAGEFQHHPVRVGVKHQGRTNDKIAEALFPVHGELKSKLLIGLLADAEVNMDSV
LVFTRTKHRANRLAEQLVNAGISAERIHGNRSQNARTEALSGFKSGKYRVLVATDIAARG
IDIDSLGHVVNFDVPVAAEDYVHRAGRTARAGKTGTAFTLVSPQEEDEIRSIERFTKRTL
TRRNLEGFDYHAKVEAKLEQPRPAQGGRGRGQGQRSSGGQTQARSGGAGSQGGQGGGGQR
QSRPADSRNAAPRNDAGRSDVGGGRVGPQPARRRR
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgcagctgcccgcgccgctgcgcgaggccatcgacgcgctgaagtacaccgtcccgacc
gagattcagggtttggctctgccgcccgcccgcatgggcaaagacgtgctgggcaccgcc
gcgacaggttccggcaagaccgtggcctttttgctgccggtcatcgagcgcctcctgacc
cagcgggcacgcggcacccgcgctctggtgctggcccccacccgcgaactggccgcacaa
attgaagaagtcgcccgcttcctgatcgccaacacccacctcaaggtcgtcagcattttc
ggcggcgtctcgcaggggccccagcaaaaagcgctgcgggccggcaccgacatcgtgatc
gccacgccgggccgcctgctcgaccacatcggtcagggcaacatcaatttcagcgccctc
gaagtgctggtgctcgatgaagccgacagaatgctcgacctgggcttcttgcccgacatc
cgccgggtgctgcgcgtcttgcctgacaagcgccagaccttgctgttctcggccaccatg
cccgacagcattctcaaattggccggcgagtttcagcaccacccggtgcgtgtgggcgtc
aagcaccagggccgcaccaacgacaagatcgccgaggcgctgtttccggttcacggcgaa
ctcaagtccaagctgctgatcggcctgctggccgacgccgaggtcaacatggacagcgtg
ctggtgtttacccgcaccaagcaccgcgccaaccgcctggccgagcaactggtcaacgcc
ggaatcagcgccgagcgcattcacggcaaccgctcgcaaaatgcccgcaccgaagcgctc
tcaggcttcaagagcggcaaataccgggtgctggtcgccaccgacatcgccgcacgcggc
atcgacatcgattcgctgggtcacgtggtgaacttcgacgtgccagtggccgccgaggac
tacgttcaccgcgcgggccgcaccgcccgcgccggcaagaccggcaccgcctttaccctg
gtcagcccgcaggaagaagatgaaatccgcagcatcgagcgcttcaccaagcgcaccctg
acccgccgcaacttggaaggctttgattaccacgccaaagtcgaagccaagttggagcag
ccccgtcccgctcaaggtggacgcggcaggggccaggggcaacgcagcagcggtggacag
actcaggcccgcagcggcggagcaggaagtcagggtgggcagggcggcggtggccagcgc
cagagccgccctgctgacagccgcaacgccgcaccccgaaatgacgcgggcagaagtgac
gtgggtggcgggcgtgtggggccgcaaccggctcgccgccgccgctaa
DBGET
integrated database retrieval system
