Deinococcus psychrotolerans: EHF33_13205
Help
Entry
EHF33_13205 CDS
T07550
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
dph
Deinococcus psychrotolerans
Pathway
dph03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
dph00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
EHF33_13205
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dph03400
]
EHF33_13205
Enzymes [BR:
dph01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
EHF33_13205
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
EHF33_13205
DNA repair and recombination proteins [BR:
dph03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
EHF33_13205
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Zn_ribbon_RRN7
Zn_ribbon_IS1595
Zn_Ribbon_TF
Auto_anti-p27
Zn_ribbon_TFIIB
Motif
Other DBs
NCBI-ProteinID:
AZI43584
UniProt:
A0A3G8YLW3
LinkDB
All DBs
Position
1:2673337..2674182
Genome browser
AA seq
281 aa
AA seq
DB search
MPELPEVETTRRKIEPLLVGRVLTRIEHDAPHKYTDTHKAEGRTVTGIGRRGKYLLLQLA
AAKAANTDAAEDEWGDLELLVHLGMTGGFRLEAGPHTRVTLHTDQGAVYFNDARRFGKVA
VVSRGDYAAFPTLHQMGPEPLTDDFKEAEFVKLAASAGAVKPWLLSQKPVSGVGNIYADE
SLWLSRIHPAQTKLNADEAGRLYAAIREVMKAAVEAGGSSLGSGGGNYRQHDGVSGLFQH
EHHVYGKAGQPCPRCGSGIVRVVLAQRGTHYCPQCQTRKER
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaactgccggaagtcgaaaccactcgccgtaaaattgagccgctcttggtgggc
cgcgtcctcacgcgcatcgagcacgacgcgccgcacaaatacaccgacacccacaaagca
gaaggccgcaccgtgaccggcatcgggcggcgcggcaagtatttgctgctgcaactcgcc
gccgcaaaagctgccaatacagacgctgctgaagatgaatggggtgatttggaactgctc
gttcacctcggcatgaccggcggctttcggctggaagctgggccgcacacccgtgtgacg
ctgcacaccgatcagggcgcagtgtatttcaatgacgcccgccggttcggcaaagtggcg
gtggtgagccggggcgattacgccgcttttcccaccctgcatcaaatggggccggaaccg
ctcacggacgatttcaaagaagccgagttcgtcaagctggcggccagcgccggagcggtc
aagccgtggctgctctcgcaaaaaccggtctcgggcgtgggcaacatctacgccgacgag
agcttgtggctcagccgcattcatccggcccagaccaagctcaatgcggatgaggcgggg
cgattgtacgcggccatccgggaagtgatgaaggcggcggtggaggcgggcggcagcagt
ttgggcagcggcgggggtaactaccggcagcacgacggcgtttcgggcctctttcagcac
gagcaccacgtctacggcaaggcgggccagccgtgcccccggtgcggcagcggtatcgtc
agggtcgtgctggctcagcgcgggacgcattattgcccgcagtgtcagacgcgcaaagag
cgctaa
DBGET
integrated database retrieval system
