Deinococcus psychrotolerans: EHF33_14020
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Entry
EHF33_14020 CDS
T07550
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
dph
Deinococcus psychrotolerans
Brite
KEGG Orthology (KO) [BR:
dph00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dph03032
]
EHF33_14020 (topA)
03400 DNA repair and recombination proteins [BR:
dph03400
]
EHF33_14020 (topA)
Enzymes [BR:
dph01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
EHF33_14020 (topA)
DNA replication proteins [BR:
dph03032
]
Prokaryotic type
DNA Topoisomerases
EHF33_14020 (topA)
DNA repair and recombination proteins [BR:
dph03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
EHF33_14020 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Microp_apicomplexa_18
Motif
Other DBs
NCBI-ProteinID:
AZI44035
UniProt:
A0A3G8YGF7
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All DBs
Position
2:61161..63179
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AA seq
672 aa
AA seq
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MKLLIVESPAKARKIQSYLGAGWQVRACLGHVRDLPTKDDTLPDKYKDAPFAKLGIDVDN
NYAPIYVARKDKAQTIRDLRDAAKSADAVYLAADPDREGESIAWHLSVLLGLGKDALRVT
YQEITERAIRQAVAHPRTIDFNLVAAQETRRVLDRLAGYGVSPLLWKAVGGPQSAGRVQS
AALMLLSQREQSRLSFVPSAFWRVGVTVKSQPAFKAQVTAIRGVALATAASFTASGQLKP
GLNVTQLDQEKAAQLVEYLNRQQAVVSAVTLSPVVRRPPPPLTTSGLQQAANAKLKLGAA
QVTKLAQTLYEQGLITYIRTDSPHLSDEAIGLAREAVATRFGPSALPKEGRQYATKNQNA
QEAHEAIRPAGKFALPEQTGLSGDELALYRLVYERTLASQMRDAVGEKTAVTLTAGVVTL
HASGVVLTEKGFTALYDDQDSSEEEQTLPKLQVGERFALKDAKAEEKKSSAPGRFTEGKF
VQVMEKAGIGRPSTYGATLETLQKRNYVALRNRQLHVTPLGLLVASYLMKQVPQLVNAEF
TAQMEGDLDKIASGQLSRVAYLDTIWKGTLHPAIHAAKLTAPRYALPQLNAVLEVRGGIA
GLVVSGQGVALPDNVLPEDLTAQTVAALMSGTFTSPKAKSPTPKRTSGAVSSKKRTTTGP
TATKKSSKRAVK
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
gtgaaactgctgatcgtcgagtctcctgccaaggccaggaagatccagagctacctcggc
gcaggctggcaagtccgcgcctgcctcggtcacgtccgtgacctgcccaccaaagacgac
accctgcccgacaagtacaaagacgccccatttgccaaactcggcattgacgtggacaac
aactacgccccgatctacgtggcccgcaaggacaaagcccagaccatccgggatttgcga
gacgcggccaaatctgctgacgcggtctacctcgccgctgacccggaccgggaaggcgag
agcatcgcttggcacctgagcgtgctcctgggactgggcaaggacgctctgcgagtcacg
tatcaagaaatcaccgagcgggccattcggcaggccgtcgcccaccccagaaccatcgat
ttcaacctggtcgccgctcaggaaacccggcgcgttctcgaccgcttggctggatacggc
gtcagtccgctgctgtggaaagcggtgggcggcccgcagtcggcaggccgggtccagtcg
gcagccctgatgctgctctcgcagcgtgaacagtcgcggctgagtttcgttccttcggcc
ttctggcgggtgggggtgacggtgaaaagtcaacccgccttcaaagcccaggtcacggcg
atcagaggcgtagcgctggccacggccgccagttttacggcttcaggccaactcaagccg
ggtctgaatgtcacgcaactcgatcaagaaaaggccgcgcagttggtggagtacctcaac
cgtcaacaagccgtcgtcagtgctgtcacgctgagtccagtcgttcgccgtccaccgccg
ccgctgacgacttcaggactgcaacaggccgccaacgccaaactcaaacttggcgcggcc
caggtcaccaaactggcccagacgctctatgaacaagggctgatcacgtatatccgcacg
gacagtccccatctctcggatgaagcgattgggctggcccgagaagcagtcgccacgcgt
tttgggccgtctgctttacccaaagagggccgtcagtacgccaccaaaaatcagaacgcg
caggaagctcacgaagcgattcgcccggcgggaaaattcgcactcccagaacagactggg
ctgagtggtgacgaactcgccctgtaccgtctggtgtacgaacgcacgctggcctctcag
atgcgggacgcggtgggggagaagaccgccgtgacgttgacggcaggggtggtcacgctg
cacgcctccggcgtggtgctgacggagaaaggcttcacggccttgtatgacgatcaggac
agcagcgaagaggaacagactttacctaaattgcaggtgggcgagcgctttgccctcaaa
gacgccaaagcggaagagaagaaaagcagtgcgccgggacgcttcaccgaaggcaaattt
gtgcaagtcatggagaaagcggggattgggcgacccagcacgtatggcgcgaccttggag
acgttgcaaaaacgcaactacgtggcgctgcgaaaccggcaactgcacgtcacgccgctc
ggcttactggtggccagttacctgatgaagcaagtgccgcaactggtcaatgcggaattc
acggcccagatggaaggggatctggacaagattgctagcggacaactcagccgcgtggcg
tatttggacaccatctggaaaggcacccttcatccggcgatccatgcggccaaactcacc
gccccgcgttacgccttgccgcaactgaacgcggtcttggaagtacgcggtggcattgcg
gggctggtggtcagtggtcaaggtgtagctttgccggacaacgtgctgcccgaagacctg
acggcgcagacggtcgcggcgctgatgagcggcacttttacctcgcccaaggctaaatcg
cctactcccaaacgcaccagtggggcagtcagcagcaaaaaacgaacgactactgggcct
acagcaaccaagaaaagctcaaaacgggcagtgaaatga
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