Deinococcus psychrotolerans: EHF33_19975
Help
Entry
EHF33_19975 CDS
T07550
Name
(GenBank) SMC family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
dph
Deinococcus psychrotolerans
Brite
KEGG Orthology (KO) [BR:
dph00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dph03400
]
EHF33_19975
DNA repair and recombination proteins [BR:
dph03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
EHF33_19975
Archaeal homologous recombinant proteins
EHF33_19975
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_27
AAA_29
TPR_IF140_C
nSTAND3
ABC_tran
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
AZI45193
UniProt:
A0A3G8YJQ5
LinkDB
All DBs
Position
unnamed3:complement(62541..65393)
Genome browser
AA seq
950 aa
AA seq
DB search
MQAFGPYVQKQVIDFTELGERRLFLIHGPTGAGKTVLLDAICFALYGTPSGKDRDGKGLR
SHHAAENLRTEVIFDFALGDQRYRIQRTPEQNIAGKQGKSTKKLHDVTLWELVGNEETNP
IYKITPVEERIQDLLGMSVSQFRQVVLLPQGQFRELLTASSTDREKILATLFETEIYERV
TQKLVELKKSALKTWEFAREQKDAALKQWSVISLKDMEFLELQVREQREQQAGIELQARR
QANQSREMLQQGQHHDYLLKQHQDAEQQWQAFLVDAEEHSTQHQHLDRARRAEQLRHLSR
SFEDLSKEAADERQALSKAEVQLQESATQLQRHEGQLGELRRTTETAQHQLETLQAGEDL
ITELVRLEHLLETLPKEAAAQVSELTQQRQGLDQQEVKISAQLMAWPELLLEVQRLQQYP
QAQWYTALNQRQEILQDQYLQAKQQLRLSEGQWKAFLDKLEQLFPSNERLASLLPELNVR
QGTAMASTQVTAFLEGQLQEIHSVLSSIPARQAEDKETLAILEDRLIALPSLRDELLQVR
LQLVNLRQLERESLRYQAAEEVQWQNLQIQHTETKSRYEVWQSAFPNFVSENDRPIQTKN
AHEAYLKLADELLSANNEYQKLEKRCQREEIEMQLRVHSLRKILERLKSVQEEVTVKIGE
SIFDSLESVNESLLDSDALQELERSVQIFSQQQNILEAKLHQSYQTAQGILKPDLELLQA
DVEFTDTHLQEIIHFSIELEQKLRNLNYAKDNFTNLQEEEKKLQNEYNEIKILAECASGT
ETGTDKFSLQRFVLSAFLDEVLELATKRLSGMSRGRYHLQRMKTAQSGAGATGLDIQVFD
QHTGIARHAKTLSGGEGFLASLSLALSLAQVVQQRAGGRHVDTIFIDEGFGTLDPETLDL
VMRCLIDLQSEGHLIGVISHVAEMKERIDARLEIRHSTSAKGSEAYFHVV
NT seq
2853 nt
NT seq
+upstream
nt +downstream
nt
atgcaagcgtttggaccttacgttcagaaacaagtcatagattttacagaactcggtgag
cgcaggttgttcctgattcatggaccaacgggcgctggaaaaacggttttgcttgacgcc
atttgctttgcactttacggtaccccttcaggtaaagaccgggatggtaagggcctgcgc
agtcaccacgcggctgagaatctccggactgaggtgatcttcgattttgcgctaggcgat
cagcgataccgcatccaacgaactcctgaacaaaatattgctggcaagcaaggcaaatca
acaaaaaaattacacgatgtcacgttatgggaattggtaggaaacgaagagacaaaccca
atttataaaattacgcctgttgaagagcggattcaggatctccttggaatgtcggtcagt
caattcaggcaggtggtgttgctaccgcaaggacagttccgggaactgctgaccgcgtcc
tctacggaccgagaaaaaattcttgccacgctcttcgagacagagatttacgaacgggtt
acgcaaaagcttgttgaactcaaaaaatcagctttaaaaacctgggaattcgcaagagaa
caaaaagatgcggcactgaagcagtggtcagtcatttctttaaaagacatggagttcctt
gaactgcaggtgcgtgagcaaagggaacagcaggctggcattgaacttcaagcgcggcgt
caggcgaatcaatcccgcgagatgcttcagcaaggccagcaccacgattatcttctgaag
cagcatcaagatgcggagcagcaatggcaggcgtttcttgttgacgctgaggaacacagt
acacaacatcagcaccttgaccgggcacggcgcgcggagcaactccggcatctttctcgg
tcgttcgaggatctgagcaaagaagccgcagatgaacgtcaggccctttcaaaagctgag
gtgcaacttcaagagagtgctacccagcttcaaaggcatgaaggtcagctgggtgaactg
agacggactacggaaaccgctcagcatcagctcgaaacgttgcaggcaggtgaagacctg
attactgaactggtacgcttagagcatctccttgagacgctcccgaaggaagcggcagct
caagtcagcgaattgacacaacaacgtcaagggttggatcagcaagaagttaagatttcg
gcgcagctgatggcctggccagagctgctgctcgaggttcagcggttgcagcagtaccca
caggcgcagtggtataccgccttgaatcagcgccaagaaattttacaagaccagtatttg
caagcaaagcagcagctacgactctcagaaggacagtggaaggcatttttagataagctg
gagcagctttttccttccaatgaacgacttgcgtcgctgctgcctgaattgaacgtacgc
caaggcaccgcgatggcgtcgactcaggtgacggcgtttttagagggtcaactccaagaa
atccatagcgtattatcaagtatcccagcgagacaagctgaagacaaagagacgctcgcc
attcttgaagaccgcttaatagcgctgcccagtttacgagatgaactcctccaagttcgg
ttgcagctggtcaacctgcgccaattggagcgtgaatcgctgcgctaccaggctgccgag
gaagtccagtggcaaaatcttcaaattcagcacaccgaaaccaaatctcgttacgaagtt
tggcagagtgcttttccaaacttcgtaagtgaaaatgaccggccaattcaaacaaaaaat
gcacatgaagcttacctcaaattggcggatgaactgctcagcgcaaataacgaatatcag
aagctcgagaagcgttgccaaagggaagagatcgagatgcagctccgtgtacactcgctc
agaaaaatccttgaaagactcaaaagtgttcaagaagaggtgacagttaaaattggagaa
tcgatctttgatagtctcgagagtgtcaacgaatctcttctagattctgatgctctccag
gaacttgaacgtagcgtccagatcttttcccagcaacagaacatactggaagcgaaactt
catcaatcctaccagactgcacaaggcatcctcaaacctgatttagagttgttacaagcc
gacgtagaatttacggacacgcatctacaagagattattcatttcagcattgaattagag
cagaagttgagaaacctaaattatgcaaaagataattttaccaatctccaagaagaagaa
aagaagctgcaaaacgaatacaatgagatcaagattctggccgaatgtgcttccggaacc
gaaacgggaaccgacaaattcagccttcagcgcttcgtgctcagcgctttccttgatgaa
gttctggagttggccacaaagcgactcagtggaatgagtcgtggacgctaccacctccaa
cgaatgaaaacagcacaaagtggagcgggcgcgaccggattggatattcaggtctttgac
caacatacagggatagctcggcacgccaagacactttcgggaggcgaaggtttcctggcc
agtctgagcttggccttgagcttggctcaggtcgtgcagcaacgtgctggcggacgccat
gtggataccatctttattgatgaaggattcggaactctagatccagaaacactggacctg
gtgatgcgatgcttgattgatctgcagtccgagggacatctgatcggcgttatctctcac
gttgcggaaatgaaagaacgcattgatgcacgtttggagatccggcactcaacatcggcg
aaaggaagtgaggcttacttccatgtggtgtag
DBGET
integrated database retrieval system
