Pseudodesulfovibrio piezophilus: BN4_10771
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Entry
BN4_10771 CDS
T02481
Symbol
pnp
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
dpi
Pseudodesulfovibrio piezophilus
Pathway
dpi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dpi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BN4_10771 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dpi03019
]
BN4_10771 (pnp)
03016 Transfer RNA biogenesis [BR:
dpi03016
]
BN4_10771 (pnp)
Enzymes [BR:
dpi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
BN4_10771 (pnp)
Messenger RNA biogenesis [BR:
dpi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
BN4_10771 (pnp)
Transfer RNA biogenesis [BR:
dpi03016
]
Prokaryotic type
tRNA degradation factors
BN4_10771 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
KH_1
S1
KH-I_KHDC4-BBP
KH_2
Motif
Other DBs
NCBI-ProteinID:
CCH48008
UniProt:
M1WUY8
LinkDB
All DBs
Position
811062..813284
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AA seq
740 aa
AA seq
DB search
MTMIPFDATSVTAKVGDIDITIETGKYARQASGAVTITSGKTTVLVTAVTQPLAIDRGFF
PLTCNYQEMAYAAGRVPGNYFRREGRPSEHETLVSRLIDRPIRPLFADGFADEVQIIATV
LSADKSVNPDVLALTGASAACHISKMPFLGPIVGARVGYVNNEFVLYPTYKGIEEESTLN
LVFAATRDAMVMVEGGAKFVSEDIIADALAWGHEQVAPLFDIQDELREKVGVPKIEVETP
AQDAELVEFLGDFITADLEKALTTPEKMIRYAAKDAAKQKAKDAVADKFPEDEAKLKAVG
DVIGSMTKKIVRNRIVKEGLRIDGRDTTTVRPLSIQTGVLSQTHGSVLFRRGETSALAVA
TLGSTRDEQRYDSLLGDATKRFMLHYNFPPYCVGEARMLRGTSRREVGHGALAERAISPV
LPNAEDFPFTIRVVSEIMESNGSSSMASVCGATLSLMDAGVPISEPVAGIAMGLCKEDDQ
YFVLTDILGDEDALGDMDFKVAGTRDGITAIQMDIKIAGIPSEVLKKALYQAKEARTHIL
DHMGEELATPRKELSELAPQMAVVHIDPEKIRSVIGPGGKNIKAITAETEADIDIEDSGK
ISIFAPTLASMEKAKEMVLYYDQKPEPGKNYLGTVRKVLEVGALVEILPGQEGMLHISQL
DFERVERVEDVVQLGQEVWVKCIALEPGGRIRLSRKAWLMEEAGQEVNLDDFKRPAPRGG
DRNDRRENNRGRRDNNRGRR
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atgacaatgattccatttgatgccacaagtgtcaccgccaaagtcggtgacatcgacatc
acaattgaaacgggtaaatatgcccgccaagccagtggagctgtgaccatcacctctggc
aaaaccactgttctggtcactgccgtgacccaacccctggcaattgatcgcggctttttt
ccgctgacatgcaattatcaggaaatggcttatgccgctggtcgcgtgccgggcaactac
ttccgccgagaaggtcgcccttctgaacatgaaactttagtttcccgtctcatagatcgc
cccattcgccctcttttcgctgatggctttgccgatgaagttcagatcatcgccactgtt
ctgtctgctgataagagcgtcaaccccgacgtcctggctttgaccggtgcttcagccgca
tgccacatatccaaaatgcctttcctcggccccattgtcggtgctcgtgtgggatacgtg
aacaatgagtttgttctctaccccacttacaaggggattgaagaagaatccacactgaac
ctggtcttcgccgcaacacgtgatgccatggtcatggttgaaggtggagccaagttcgtc
agtgaagatatcatcgctgatgctttggcatggggccatgagcaggtcgctcctctgttc
gatattcaagacgaactgcgcgagaaagttggcgttcccaaaatcgaagttgaaactcct
gctcaggatgctgaactcgtcgaatttctgggagacttcatcaccgctgatctggagaag
gctctgactactccggagaagatgatccgctatgcagccaaggatgctgcaaagcaaaag
gccaaagatgccgtcgcagataaattccccgaagatgaagccaagctgaaagctgtgggc
gatgtcatcggaagcatgaccaaaaaaatcgtccgcaaccgcatcgtcaaagaagggttg
cgtattgacggtcgtgacacgaccacagtccgcccgctgtccatccagaccggcgtcctg
agtcagacacacggttccgttctgttccgccgtggtgaaaccagcgcactggctgttgcc
acccttggttccacgcgcgacgaacagcgttatgactccctgcttggagatgccaccaag
cgcttcatgctgcattataacttcccgccatattgtgttggtgaagctcgcatgcttcgc
ggcacctctcgtcgtgaagttggtcacggagccttggctgaacgtgccatctccccagtt
ctgcccaatgccgaagacttcccgttcaccattcgtgtcgtctccgaaatcatggaatca
aacggttcctcttccatggcatcagtatgcggcgcaaccctgtccctgatggacgcaggt
gtgcctatctccgagccggttgcaggtatcgccatggggctgtgcaaagaagacgaccag
tactttgtcctcacagacatcctcggtgatgaagacgcactcggcgatatggacttcaaa
gtcgcaggaacccgggatggcatcaccgctatccaaatggacatcaagatcgctggtatc
ccctcagaagtcttgaaaaaggcactgtaccaggcaaaagaagcccggacacatatcctg
gatcatatgggtgaagagcttgccacaccacgtaaagaactctctgagttggctccgcaa
atggccgtggttcacattgatcccgagaaaatccgctctgtcatcggacccggtggtaaa
aatatcaaggcaatcacagctgagactgaagccgatatcgatatcgaagattccggcaag
atttccatctttgccccgactctggcttccatggaaaaggccaaggaaatggtcctctac
tatgaccagaaaccagagcctggcaagaactacctcggtactgttcgaaaagttctggaa
gtcggagcactggtcgaaattttacctggtcaggaaggtatgctgcatatctcccagctt
gatttcgagcgggtggaaagagttgaagacgttgttcaacttggtcaggaagtatgggtc
aagtgcatcgcccttgagcctggcggacgtatccgtctgtcccgcaaggcatggttgatg
gaagaagccggacaggaagtcaacctggatgacttcaaacgtccagctcctcgtggcgga
gatcgtaacgatcgtcgtgagaataatcgcggacgccgcgataacaaccgcgggcgccgt
taa
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