Pseudodesulfovibrio piezophilus: BN4_11745
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Entry
BN4_11745 CDS
T02481
Name
(GenBank) Exonuclease RNase T and DNA polymerase III
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
dpi
Pseudodesulfovibrio piezophilus
Pathway
dpi03030
DNA replication
dpi03430
Mismatch repair
dpi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dpi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BN4_11745
03430 Mismatch repair
BN4_11745
03440 Homologous recombination
BN4_11745
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dpi03032
]
BN4_11745
03400 DNA repair and recombination proteins [BR:
dpi03400
]
BN4_11745
Enzymes [BR:
dpi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BN4_11745
DNA replication proteins [BR:
dpi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BN4_11745
DNA repair and recombination proteins [BR:
dpi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BN4_11745
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
CCH48980
UniProt:
M1WM48
LinkDB
All DBs
Position
1821794..1822336
Genome browser
AA seq
180 aa
AA seq
DB search
MPSTIDNTRFVAIDFETADSKRDSACAVGLVVVENGEIVAREYRLIRPPRKKFNPYCVRV
HGIYWEDVCDQPTFGSLWPELEPVFHGADFIVAHNASFDKSVLHTCCRDTGWDAPHQPFL
CTVQLSRKTWELPSNKLPRVCEHLGISLDHHHAASDAEACALIAVSGLRENPAFLKKVLP
NT seq
543 nt
NT seq
+upstream
nt +downstream
nt
atgccctcaacaatagacaatacccgctttgtcgccattgattttgaaacagccgattcc
aaacgcgacagtgcctgcgctgtcgggcttgtggtcgtcgaaaatggcgaaatagtggcc
cgcgaatatcgcctcattcgaccaccccgaaaaaaattcaacccctactgcgtccgcgtc
catggcatttactgggaagatgtctgtgatcaaccgaccttcggctctctctggcctgaa
ctggaacccgtctttcacggtgcggatttcatcgtggcgcacaatgcctccttcgataaa
tccgtcctccatacatgttgccgtgatacgggttgggatgccccacaccagccttttctc
tgtacagtccagctttcgcgcaagacatgggaactgccctccaacaagctccccagggtt
tgtgagcatctcggcatttccctggaccaccaccatgcggcatcggatgcagaggcctgt
gccctcatcgccgtgagcggcctgcgcgaaaacccggcctttctaaaaaaggttctcccg
taa
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integrated database retrieval system
