Pseudodesulfovibrio piezophilus: BN4_11921
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Entry
BN4_11921 CDS
T02481
Symbol
radA
Name
(GenBank) DNA repair protein radA homolog
KO
K04485
DNA repair protein RadA/Sms
Organism
dpi
Pseudodesulfovibrio piezophilus
Brite
KEGG Orthology (KO) [BR:
dpi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dpi03400
]
BN4_11921 (radA)
DNA repair and recombination proteins [BR:
dpi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
BN4_11921 (radA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
RecA
AAA_22
AAA_24
DnaB_C
AAA_16
AAA
NACHT
nSTAND3
ChlI
SLFN-g3_helicase
ABC_tran
FeoB_N
IstB_IS21
Motif
Other DBs
NCBI-ProteinID:
CCH49156
UniProt:
M1WK84
LinkDB
All DBs
Position
2014382..2015707
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AA seq
441 aa
AA seq
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MKTKEAFRCSACGAQSPRWKGQCSSCKEWNTLEPVTVSKRTSTPVGAAASQDRPRPLEDL
TTENLNSRTSGMPSLDDLLGTGLVPGAAILLGGEPGIGKSTLLLQLAGSQARLGHTAVYL
SGEESLPQLKARAERLDLLGPGLMALSTNKVEDALAILSEPEPPELLIVDSVQTLVSPMA
EGIPGSVSQVRAVSAELVEKTKKTGTTLILVGHVTKDGQIAGPKLLEHMVDTVLYIEGDR
KHFSRILRVLKNRFGPSDELVVFTMKEKGLEVVEDPATFFLGTRDPSLSGTAMAMAVDGQ
RPFAVEVQALVSKSFLSIPRRTALGFDTNRLNLLLAVLEKRLRLNLSGHDIYAKITGGLA
TRDPGLDLAVISAVLSSFYDQPLPESSVYWGEIDLNGQIRPVAAHDIRLKQSKRLGHDPA
CHSGTCPTLADLQRFLFGKRN
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaccaaagaagctttccgctgttctgcctgtggagcgcaatcgcctcgctggaaa
ggacaatgttcctcttgcaaagaatggaacaccctggaaccggtcacggtctccaaaaga
acctccacaccagtgggagccgcagcttcgcaggatagaccacgtcccttagaagatctg
acgaccgagaatcttaattcccggacatcggggatgccgtccctggacgacctgcttggc
accggattggtccctggtgctgccattctgctcggcggagaacccggaataggaaaatcc
actctgcttctgcaattggcgggaagccaggcccgactggggcacacggccgtgtatctc
tcgggcgaggaatctctcccccaactcaaggctcgcgccgagcgcctggaccttctcggg
ccgggactcatggccttgtcaacgaacaaggtcgaagatgcattggccatactcagcgaa
ccggagccgcctgagttactcatagtggactcggtccaaaccctggtatcgcccatggcc
gaaggcatccccggctcagtcagccaggtcagagctgtctcggccgaactggttgaaaag
acaaaaaagaccggcaccacattgatcctggtgggccatgtgaccaaggacggccagatc
gccggccccaaactgctggaacacatggtggacaccgtactgtacatcgagggagacaga
aaacatttttcccgcatcctgcgagtcctcaaaaaccgatttggccccagtgacgaactc
gtggttttcaccatgaaagaaaaagggctggaagtggtggaagacccggcgacctttttt
ctcggcacccgcgaccccagcctatcggggacggccatggccatggccgtggatggacag
cgcccctttgccgtggaagtgcaggccctggtcagcaaatcatttctctccatcccgcgc
cgcaccgcactcggttttgacaccaaccgcctcaatctgctgttggccgtattggaaaaa
cgactgcgcctgaatctgagtggtcatgacatctacgcaaagatcacaggaggcttggcc
actcgtgacccaggattggacctggccgttatctcggccgttctgtcatccttttacgac
cagcctttaccggaatcctcggtctactggggtgagatagacctcaatggacagattcgg
cccgttgccgcccatgatatccgtttgaaacagtcaaaacgcctgggacatgacccggcc
tgtcactccggcacctgccccactctggcagatctgcaacgattcctgttcggcaagcgg
aactag
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