Pseudodesulfovibrio piezophilus: BN4_11994
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Entry
BN4_11994 CDS
T02481
Symbol
dapF
Name
(GenBank) Diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
dpi
Pseudodesulfovibrio piezophilus
Pathway
dpi00300
Lysine biosynthesis
dpi00470
D-Amino acid metabolism
dpi01100
Metabolic pathways
dpi01110
Biosynthesis of secondary metabolites
dpi01120
Microbial metabolism in diverse environments
dpi01230
Biosynthesis of amino acids
Module
dpi_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
dpi00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
BN4_11994 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
BN4_11994 (dapF)
Enzymes [BR:
dpi01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
BN4_11994 (dapF)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DAP_epimerase
Pro_racemase
Motif
Other DBs
NCBI-ProteinID:
CCH49229
UniProt:
M1WQX0
LinkDB
All DBs
Position
complement(2101847..2102704)
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AA seq
285 aa
AA seq
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MNIFGTSIPFYKMQGCGNDFVVIDNREAKVGQEVMDMWAQKLCARAFGISADGVFFLEES
DDPSLDYRWHFYNSDGSRAEMCGNASRCAGKLAHAIGLAPAEHVFGTDAGPIKAQVLVHG
PDAGRVKVQLTPPKGLKTNIKLEVDGEPLTVHFADSGVPHCVVFVDDVESLDIMNLGPKL
RYHESFAPAGTNVNFAQVKDENTLLLRTYERGVEAETYACGTGAAATQLVANSLGLTESR
ADLTTTGGEVLTVFLEDGNVFLQGAAELTFKGEVYLGPLGLIEAL
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgaatatttttggtacatccattcctttttacaagatgcagggctgcggcaatgatttt
gttgtcatcgataatcgtgaagccaaagtcggacaggaagtcatggacatgtgggcccaa
aaactctgtgcccgtgcatttggtatctcggcggatggggtgttctttttggaggaatca
gatgatccttccctcgattaccgttggcatttctacaattctgatggttcacgggcagaa
atgtgcggcaatgcatcgcgctgcgcgggcaagcttgcccatgccatcgggctggccccg
gctgagcatgtcttcgggaccgacgccggtcctatcaaggcccaggttctggttcatggg
ccggatgccggacgtgtcaaggtgcagttgacgccacccaagggattgaagacaaatatc
aagcttgaggtcgacggagaaccactgacagtgcatttcgcggattccggcgtgcctcat
tgtgttgtttttgttgatgatgtcgagagtctcgatatcatgaatcttggtccgaagctt
cgctaccacgagtcttttgctccggcagggaccaatgtcaatttcgctcaggtcaaggat
gagaataccctgcttttgcggacctatgaacggggtgttgaggctgaaacctatgcttgc
ggtactggtgccgctgccacgcaacttgtagccaacagtctcggtctgactgagagtcgg
gctgatttgacgaccacaggtggtgaagtgctgaccgtttttctggaggacggcaatgtt
tttttgcagggtgcggccgaactgactttcaaaggggaagtctaccttgggcctctcgga
ttgattgaagctctttga
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