Pseudodesulfovibrio piezophilus: BN4_12262
Help
Entry
BN4_12262 CDS
T02481
Symbol
rhlE
Name
(GenBank) ATP-dependent RNA helicase rhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
dpi
Pseudodesulfovibrio piezophilus
Pathway
dpi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dpi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BN4_12262 (rhlE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dpi03019
]
BN4_12262 (rhlE)
Enzymes [BR:
dpi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
BN4_12262 (rhlE)
Messenger RNA biogenesis [BR:
dpi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BN4_12262 (rhlE)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
AAA_19
AAA_22
Utp25_C
UvrA_inter
Motif
Other DBs
NCBI-ProteinID:
CCH49497
UniProt:
M1WTE5
LinkDB
All DBs
Position
complement(2405529..2406650)
Genome browser
AA seq
373 aa
AA seq
DB search
MTFSSFSFDQRIVAGIKACGYETPTPIQRNAIPVVLEGHDVMGLAQTGTGKTAAFALPIL
QHLLKDSSPKGSPRVLVLAPTRELALQIQESFIALGKQTGIRSAVVIGGVGMNPQIKAFA
QSRVIVACPGRLVRLINRGAIRLNTITTLVLDEADRMLDMGFLPDIKRILAQLPDKRQNL
LFSATMPNDIKKLADGILVNPKRVQEANTVPVTSVGHAFYTTQTHLKNDILEKLLSKAEH
ESVLIFTRTKHKAKNLSRKLNKDGYDSTFLQGNMSQSQRQRALNGFRQGQFNIMVATDIA
ARGIDCDRISHVINYDMPDTVETYTHRIGRTGRAGRSGQAVSFVTRDDKMQIRAIERVMR
IKIENNTYEGRGR
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atgactttttcatctttttcttttgaccagcgcattgtcgccggtatcaaagcctgtggc
tatgaaacccccacccctatccagcgcaacgccattcccgtggtgcttgaagggcatgac
gtcatgggtctggcccagaccggcacaggcaaaacagccgcctttgccctccctatcctg
caacacctgctaaaggacagtagtccaaaaggaagcccccgcgttctggtcctcgccccg
actcgggaactggccctgcaaattcaggaaagtttcattgcactcggcaagcagaccggc
atccgcagcgctgttgtcatcggtggcgtgggcatgaatcctcagatcaaggcctttgcc
caatcccgagtcattgtggcatgtccgggccgccttgttcggcttatcaaccggggtgcc
attcgtcttaataccatcacgaccctggtccttgatgaagcagaccgcatgctcgacatg
gggttccttcccgacatcaaacgcattctcgcgcaactgcctgacaaacggcagaacctc
cttttttcagcgaccatgcccaacgacattaaaaagctcgccgacggcatcctcgtgaac
cccaaaagggttcaggaagcaaataccgtccctgtcaccagtgtcggccatgccttttac
acaacccagactcacctcaaaaatgatattctggaaaagcttctctccaaggcggaacat
gagagtgtcctgatcttcacacgcaccaaacataaggccaagaacctgtcgcgcaaattg
aacaaagacggttatgacagcacttttctccaagggaatatgagtcaaagccaacgccag
cgggcactcaacggcttccggcagggacaattcaacatcatggttgccacggatatcgcg
gctcgcgggatcgactgcgaccggatatcccacgtcatcaattatgatatgccggataca
gtggaaacgtacacacaccgtatcggaagaaccggtcgcgctggccgttcaggacaggct
gtcagcttcgtcactcgtgatgataagatgcaaatacgcgccatcgagcgtgtcatgcga
atcaaaatcgaaaataatacctacgaaggacgcggcagataa
DBGET
integrated database retrieval system
