Pseudodesulfovibrio piezophilus: BN4_12653
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Entry
BN4_12653 CDS
T02481
Symbol
groL
Name
(GenBank) 60 kDa chaperonin
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
dpi
Pseudodesulfovibrio piezophilus
Pathway
dpi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dpi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BN4_12653 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dpi03019
]
BN4_12653 (groL)
03110 Chaperones and folding catalysts [BR:
dpi03110
]
BN4_12653 (groL)
03029 Mitochondrial biogenesis [BR:
dpi03029
]
BN4_12653 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dpi04147
]
BN4_12653 (groL)
Enzymes [BR:
dpi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
BN4_12653 (groL)
Messenger RNA biogenesis [BR:
dpi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
BN4_12653 (groL)
Chaperones and folding catalysts [BR:
dpi03110
]
Heat shock proteins
HSP60 / Chaperonin
BN4_12653 (groL)
Mitochondrial biogenesis [BR:
dpi03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
BN4_12653 (groL)
Exosome [BR:
dpi04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
BN4_12653 (groL)
Exosomal proteins of other body fluids (saliva and urine)
BN4_12653 (groL)
Exosomal proteins of breast cancer cells
BN4_12653 (groL)
Exosomal proteins of colorectal cancer cells
BN4_12653 (groL)
Exosomal proteins of bladder cancer cells
BN4_12653 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
KH_PARP14_2
NAD-bd_HRPKS_sdrA
DUF4923
Motif
Other DBs
NCBI-ProteinID:
CCH49886
UniProt:
M1WKN0
LinkDB
All DBs
Position
complement(2842098..2843687)
Genome browser
AA seq
529 aa
AA seq
DB search
MAKAIDYKAVAREGMQKGVNTLANAVKVTLGPKGRNVMLEKTWGAPQVTKDGVTVAEKID
LEDKLENMGAQMVKQVASKTNEIAGDGTTTATILAQSIFNEGVKLLAAGRNPMSIKRGID
MAVEHVVAELEKLTKPVKKSSEIAQVGAISANNDDAIGAILAEAVEKVGDNGVITVEESQ
GLTIELDVVEGLQWDNGWLSPYFVTDHDKQEAVYENPFILLSEGKISNIKPLVPILEAVA
KAGRPLVIVAETIENEALAGLTINAMRGALKVCAVKAPGFGDRRKDMVRDIAIMTGAGVV
SEDTAVTLESIKPEDFGTAKKVVIGKKNTLIVGGAGEKAAIERRCEEIKGLAENATSDYD
REKLQERLAKMVGGVAVVKVGAPTEIEMKERKDRVEDALNATRAAVDEGIVPGGGTALVR
AGTGLCELKGDNDTEQAGIAIIARAIEEPLKQIANNCGLEGTVVVEKVKGLDGTNGFNAR
TGKYVDLVEAGVIDPKKVTRIALQNAASVSSMLLTTECAISEAVVEEDD
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagcaatcgattacaaagcagtcgcccgtgaaggcatgcagaaaggcgttaac
actctggccaatgccgtcaaggtaaccttgggacccaagggacgtaacgtcatgttggaa
aagacctggggcgctccccaggtaaccaaggacggcgtcaccgtcgctgaaaagattgac
ctggaagacaagctcgaaaacatgggcgcccagatggtcaagcaggtcgcatcaaagacc
aacgaaatcgccggagacggaaccaccactgcgactattctggcccagtccatcttcaat
gaaggtgtcaaactgctggccgccggtcgtaaccccatgtctatcaaacgcggtattgac
atggctgtcgagcatgttgtcgcggaattggaaaaattgaccaagcccgtgaaaaaaagc
tccgaaatagcccaggtcggcgcaatttcagccaacaatgacgatgccatcggagcaatc
ctggctgaggccgtggaaaaagtcggcgataacggagtcatcacagttgaagaatcccag
ggattgaccatcgagttggatgtggtcgaaggtctccagtgggataacggttggctctca
ccgtattttgtcaccgatcacgacaagcaggaagcagtatacgaaaaccccttcattctg
ctttccgagggaaaaatctccaacatcaaaccgctggttcctattctggaagcagtggcc
aaggctggacgtcctttggtgatcgtggccgaaaccattgaaaatgaggcgttggcaggt
ctgaccatcaatgccatgcgtggcgcactcaaggtctgcgctgtcaaggctcccggtttc
ggagaccgtcgcaaagacatggttcgcgatatcgcgatcatgaccggcgcaggcgtcgtg
tccgaagacactgccgtcaccctggaatccatcaagcctgaagacttcggaaccgccaaa
aaagtggtcatcggcaagaaaaacaccctcatcgtgggcggagcaggcgagaaggccgcc
atcgaacgccgttgcgaagagatcaaggggctggccgaaaacgccaccagcgactacgac
cgtgaaaaactgcaggaacgcctggccaaaatggtcggtggcgttgccgtggtcaaggtc
ggcgctcccactgaaatcgagatgaaagagcgcaaggaccgcgtcgaagatgctctcaat
gcaacccgcgccgcagtcgatgaaggtattgttcccggtggtggcacagcgctggtccgt
gcaggcactggcctctgcgaactcaagggagacaacgacaccgaacaggccggaatcgcc
attattgctcgggccattgaagagcctctgaaacagatcgccaacaactgcggcctggaa
ggcacagtcgtcgtcgagaaagtcaaaggtcttgatggcaccaatggcttcaacgcccgg
accggcaagtatgtcgatctggtcgaggccggagttattgatcccaagaaggtcacccgc
atcgccctgcaaaacgctgccagcgtttccagcatgctgctgaccaccgaatgcgctatt
tccgaggctgtcgtcgaagaagacgactaa
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