Pseudodesulfovibrio piezophilus: BN4_12713
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Entry
BN4_12713 CDS
T02481
Symbol
ynjB
Name
(GenBank) Protein ynjB
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
dpi
Pseudodesulfovibrio piezophilus
Pathway
dpi02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
dpi00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
BN4_12713 (ynjB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dpi02000
]
BN4_12713 (ynjB)
Transporters [BR:
dpi02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
BN4_12713 (ynjB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
DUF6491
DUF6694
Motif
Other DBs
NCBI-ProteinID:
CCH49946
UniProt:
M1WKP2
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All DBs
Position
complement(2909798..2911021)
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AA seq
407 aa
AA seq
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MTMKKLLIVIMMIVILAGCAEEPPKQDGTALLNENWTSIEKAAEGSTVRFYMYGGFAHVN
NWVDTYVAQEVKKRFDISLVRVPMDASVFVNKLLTEKDAGKTIGSIDLLWINGENFKTTK
QAGTLFGPYAEKLPNYIKHVDKSLASFDFGYPVDGFEAPYGRAQFVYEYDTQTTPTTPAS
FLDLSSWVRENPGQFTYPQPPDFTGSAFIRQAFYATTGGAQQYMDGWDEELFNRQAPKLW
EYLNELKPFLWQKGKSYPKSSAEMDTLFSRGELSINMSYHPLHAQSKILDGSYPESIHTY
VMHEGALFNLHFTAIPANAPNKAGAMVVSNFLLSPEAQLSKLDPGNWGDFPAIEMLTLSE
ENRHAFEGVELGSATLQPDILTQNSLPEIPAEYVEALEKGWEENVLR
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgacaatgaaaaaattactgatcgtcatcatgatgatagtcattctggcaggatgcgcc
gaggaaccgccaaaacaggacgggaccgcactgctcaatgaaaactggacatcgatcgaa
aaagcagcagaaggaagcactgtccgattctatatgtacggtggtttcgctcatgtgaat
aactgggttgatacatacgttgcccaagaagtcaaaaaacgctttgatatcagtctggtt
cgtgtccccatggacgcgagtgtctttgtcaacaaactcctgactgaaaaggatgcgggc
aagacaattggatccattgatctgctctggatcaacggcgaaaatttcaagacgacaaaa
caggccgggacgctctttggtccctatgccgaaaaactgccgaactatataaaacatgtg
gacaaatctcttgcctcctttgacttcggttatcctgtcgatggatttgaagctccttat
ggacgcgcccagtttgtctacgaatatgatacccagacaacgccaacaacaccggcgagt
ttcctggatctttcctcatgggttcgggaaaatccgggccaattcacgtaccctcagccc
cctgattttaccggctccgcattcatccgacaggctttttacgccacaaccgggggagca
cagcagtatatggacggatgggatgaggaactgttcaacaggcaagctcccaagctttgg
gagtacctcaatgagctcaaaccgtttctgtggcaaaaaggcaaatcctaccccaaaagc
tctgcagaaatggacactctgttctcccgaggggaattaagcatcaacatgtcctatcat
cctcttcatgcccaatcgaaaatcctggatggctcctaccccgagtctatccacacctat
gtcatgcatgaaggagctctcttcaatctgcatttcacggcgattcccgccaatgcgccc
aacaaggcaggagccatggtcgtctccaatttcctgctctcgccggaagcacaactctcc
aaacttgaccccggcaactggggggactttccagccattgaaatgctcaccctctccgaa
gagaaccgacatgcctttgaaggcgttgaactcggctcagcaaccctgcaacccgatatt
ctgacacaaaattccctcccggaaatccctgccgagtatgttgaggcactggaaaagggc
tgggaggaaaatgtcctcaggtaa
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