Pseudodesulfovibrio piezophilus: BN4_12829
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Entry
BN4_12829 CDS
T02481
Name
(GenBank) protein of unknown function
KO
K20276
large repetitive protein
Organism
dpi
Pseudodesulfovibrio piezophilus
Pathway
dpi02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
dpi00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
BN4_12829
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin_5
Cadherin
Cadherin_4
Big_9
HemolysinCabind
DUF642
Motif
Other DBs
NCBI-ProteinID:
CCH50062
UniProt:
M1WU03
LinkDB
All DBs
Position
complement(3053404..3060330)
Genome browser
AA seq
2308 aa
AA seq
DB search
MDTGDSAVGSVTELGANVDQDVSLTTSGTLSISDADSGQALFDTNVDDSDNLGHLTITED
GQWTYTIDNTLSEVQQLGTGDSFTETFTVTSADGTDSQTITVTVNGTNDAPQITDVVSYA
NDFEHGATGWSNNTVTETDGVFTDFLGRFGTGDSTVKTFDVVDGADSVTIDFDMYEIDSW
TQTDNAWGHDDLIITVDGNDITIPLERSNMDYSDEDNAVVRTGTVETESGTITWTFTATE
PGTTNKGFGSYEDQIHHVTLTIENPGDSVTLGLGSTLNEALNNESFGIDNIVVNASDDAG
NPVFSVLENITDDTTVAQLISTDVEGHDVVYQIVSVIDADGNDVSGMFTIDGDKVVAVGD
SGFDYETNASYTVTVVPTDTPAEGALSGDPVSFTVRIGDVNEAPDLDFSSLDTSTNYIVN
GSFEDVAIDSGDWAQGHTPEGWTLVEGDRWEVMSGDRFGIDGASDGNNVIDFGVGTHEAL
VISQEVTGLSEGDYVLTLDMFDRSSNLGGDDGGAINVYWNGELVGTFNPGDTEWETGTIN
ITVGADETSGTLVLESSDNDGYGNVVDNISLYAVSDDAGSGVTITENSAAGTYVATALGT
DVDTPDEDLRFSIADGTPFVIDAVTGVITLAEGATLDYENQDSYSVDITVTDGDLSTTKT
LTINVGDVNEAPTATDIDLGHMSEDGIGGDGSITFSADQLLAGASDVDGDSLSIDNLSLA
DGHGTLTDNHDGTWTFTPDANWNGDVEFNYSVTDGTLSTEQTASLTVDAVDDPTVIDFAT
GVSGHNLVINGSFEDVTIDSGDWAQGHTPEGWTLVEGDRWEAMSGDRFGIIGASDGDNVI
DTGVGGNEALVISQEISGLSEGQYILELDLFDRGSNLGEADSGNIEVYWNGELVATYNPD
DVNWETGTVVITVGEGETSGELVLASYNNDNYANVIDNISLHSVDSIESGPVEINEGVAN
GTYIATAFASDVDSTDLSFSITDPDSPFSIDSETGIITVSDSADLDGNNNYDIVVTVTDG
DGHTVNDVLNVVVNEPPTSTDFTVSGDTMHAPIAIDFTEDVNIQDIDGTVTDVIITSLPD
ADSGTLYFNGEPVVEGNTYSLSEGSFSFQAEETDHSTILLGSKEGNDPGLTNWGADSDDV
RTTTLSQEVDGHTVTVTSGTGELVQDGDGNYSIVNAGIGDALQQYDENDPSHIGSGIADN
DGNGIESGETISVSLGGVVSTAQVGLDGLGSHFEAESGEQAKAVWIATLDGEVVGSGVVE
NAVDNDTLFEQLTITTDMIDGGLFDTITFTTDSSSGSNWELRYVEAEYGLDTSFTYVPVD
NDGLAGNESSVSIEITPDVLTTNEPTSDSFATHVDHGQSVAIDFGGHVLDVEDGSVNTVV
IKSLPTDGSLVDDHGNAIVVGQEYNVNDINYVASDSTDGPDATGVFLGTRHEGDQSIDNW
GTEVDANTRVLHVSDTISVTVSSNDGALTQYNAENPNHMGVGIGDNDGNGINSGEVITVA
FDGAQVSTAEVTFDGLGSDFAEGGSVGATATWVAYNGDTIVAQGEVYAPESGLESVVTIG
QDILNGQLFDRIEFSTDSDSSSNWELRSVDAEFGSGDSFEYYPVDSDGLTGNASTVTLTY
DAPDTITHEAPVLDLGDGSQVVYDGEHAGYTNMLGIYFVEDGTPSNPEIILTDSKDVSIL
NNVIATFEGDQDVHFFLVSDAGGEFSADQLGSEMHFVMDNGNWALAMGNDTVDVQFDIAQ
FNPNGEEASFRFETNADGSLSVEVDDQLGTWDDDDFDDISATVNLVDDGTSDYATTWVEN
HEGVSIAGDVAISDEDSSRMSSATIILTNAHDGDILNTDALPDGITAQVVDNGDTITVTL
SGTMPISDYQEAIHSITYENHASSDPDVTDRVVEVTLFDESGTSSNVATTTISVVDVDVS
SQIVLNPSFESSDRIYGSWTQTDGVDNWSNPSDGDIEIWNNHMGKNAADGNQFIELDSAN
DVDSLSQIIATKAGEMVNLSFAFAPRPGTAGETNDFDVSLGGVLVATVAWNAVDHVFEVT
QPGSTEVTTFDYDGSDSGWNTISLDVQAPTDHAELLFTEHGDHNDTFGILLDDVQVHREF
DSEILGTHHADTLLGTPGDDFIMAVDNTSDSGHHNHYGSHMTGDYIDGGAGHDAIYGGDG
NDILIGGEGNDFIYGGGGNDTIDAGSGNDFINAGSGHNVVTTGDGNDTLFIDQSALNQSH
SEIVVNDFVVGTDALEMGDGMSVKDITTVTENSIQYTQVLVGDDHDNNVIVKLLGVTQTD
LDSHSTGVDAATHSDDLIQYMIDSGHNS
NT seq
6927 nt
NT seq
+upstream
nt +downstream
nt
gtggacacgggagactcggccgtagggtcggtgacagagcttggagcgaatgttgatcag
gatgtttccctgacgacctcgggcactctttccatcagtgatgcggattccggccaggcc
cttttcgacaccaatgtagatgattctgataatctgggacacctgaccattaccgaagac
gggcaatggacctacaccatcgacaacactctctctgaagtgcagcagcttgggaccggc
gactcattcacggagacctttaccgtgacttcggccgatggcaccgactcacagaccatc
acggtcaccgtcaatgggacgaatgatgcaccacagattacggatgttgtttcttatgca
aatgatttcgaacacggggcaacaggatggagcaacaacacagtcaccgaaaccgatgga
gtctttaccgacttcctcggccgattcgggacaggagattccacggtcaagacctttgat
gtcgtggacggtgctgattcagtcaccattgactttgacatgtacgaaatcgattcatgg
acccagaccgacaatgcatgggggcatgatgatctcatcatcacggtagacggcaatgat
atcactatcccgctggaacgcagcaacatggactacagtgatgaagacaatgccgtggtc
aggaccggaacggtagaaacggaaagcggcacgataacctggaccttcactgccaccgaa
ccagggacgaccaacaagggattcggcagctatgaggatcaaattcatcatgtcaccctc
actatcgaaaatcctggagactccgttactttggggttggggtcaacgctcaacgaagcc
ctgaacaacgagtcattcggaatagacaacatcgtcgtcaacgcttcggatgatgcaggc
aacccggtcttcagcgttcttgaaaacatcactgacgatacgactgttgcacagttgatc
tccaccgatgtcgaagggcacgatgtagtctatcaaatcgtcagcgtcattgacgccgat
ggcaatgatgtcagcggtatgttcaccatcgacggtgacaaggtcgtggctgtgggggat
tccgggtttgattatgaaaccaacgccagctacaccgtcacggtagtccccaccgacact
cctgccgaaggagctttgtccggcgatcccgtctctttcaccgtccgtatcggcgacgtc
aatgaagcccctgatctcgatttcagctctctggatacaagcacgaattacatcgtcaac
ggcagcttcgaagatgttgccatcgattccggcgactgggcgcaagggcacaccccagag
gggtggacactggtcgagggcgaccgatgggaagtcatgagcggcgaccgcttcggtatt
gacggcgcatctgatggcaacaacgtcatcgatttcggtgtcggcacccatgaagccctg
gtcatttcccaggaagtcaccggtctgagcgaaggtgactatgtcctgactctggacatg
ttcgacagaagttccaatctgggtggagatgatggcggggccatcaatgtctactggaac
ggagaattggtcggcactttcaatccaggtgataccgagtgggaaaccggcactatcaac
atcaccgttggcgcagatgaaacctccggcacactggtgctcgaatcctccgacaatgac
ggatatggcaatgtggtcgacaatatcagcttatatgctgtttctgatgatgcaggatca
ggtgtgaccattaccgagaattccgcagccggaacctatgtggccacggcgctcggaacc
gatgtcgataccccggacgaagatctgcgcttctccatcgcagacggtacacctttcgtc
attgatgctgtcaccggtgtcatcacactggccgagggcgcgactctcgactatgagaat
caggattcctactccgtggatatcacggttactgatggagacctctccaccaccaagacc
ctgaccatcaatgtcggggatgtgaacgaagcccccactgcgactgatatcgatcttgga
catatgagtgaggacggtatcggtggagacggttccattaccttcagtgcagaccaactg
ctggccggagcttccgatgtggacggcgattccctgtccattgacaatttgagcctggca
gatgggcatggcacactgactgacaaccatgacggaacatggacatttacccccgacgct
aactggaacggcgatgtcgagttcaattattcggtgacggatggaacactgtccacggag
caaacagccagcctgaccgttgacgcggtggatgatcccacggtcatcgactttgcaacc
ggcgtctcaggccacaaccttgtcatcaacggcagctttgaagatgtcaccattgattcg
ggcgactgggcacagggacacacccctgagggatggactctggtcgaaggcgaccgatgg
gaagccatgagcggcgaccgtttcggcatcataggcgcatccgatggcgacaacgtgatt
gacaccggcgtgggtgggaacgaggccttggtcatctcacaagagatttcaggcctgagc
gaaggacagtatattcttgagcttgacctcttcgatcgaggctcaaatctcggcgaagcg
gacagcggcaatatcgaagtttactggaatggtgaacttgtcgctacgtacaacccggac
gatgtgaactgggaaaccggtactgtagtcataacagtaggagaaggcgaaacctcggga
gaactcgttctggcgtcctacaataacgacaattacgcaaacgtcattgacaatatctca
cttcatagcgtcgattcaatcgaatccgggccggtggaaattaacgagggagtcgccaac
ggcacatatatagccacggcttttgcctctgatgtggactccacagacctcagtttctcc
ataaccgatcctgactcaccattttcgattgattctgaaaccggaattataaccgtctcc
gactctgctgatctggatggaaacaacaattacgacatcgtggtgaccgtaacagacggc
gatgggcatactgtcaatgacgtcttgaatgtggtcgtcaacgaaccgcctaccagcaca
gacttcacggtctccggtgacaccatgcatgcacctattgccatcgacttcacggaagat
gtcaatatccaggacatcgacggcactgtcactgacgtgattatcacctccctgccggac
gccgattcagggactctgtacttcaacggtgaaccggtggtggaaggcaacacctactca
ctgtccgaagggtccttttccttccaggcggaggagaccgaccattccacaatcctgctt
gggagcaaggaagggaacgatccgggactcaccaactggggcgcggacagcgacgatgtc
cgcacaacaaccctgtcacaagaagttgacggacacaccgtaactgtcaccagcggcacg
ggcgaactggttcaggacggcgatggcaattattccatcgtcaacgccggaataggggac
gccctgcaacagtacgatgaaaatgatcccagtcacatcggaagcggcatcgctgataat
gatggaaacggtattgaatcgggagaaaccatctctgtctcgcttggcggcgtggtctcc
acggcccaagtcggtcttgacggactcggcagccactttgaagcagagagcggagaacag
gccaaggcggtctggatcgcaactcttgatggtgaagttgtcggctctggcgtggtggaa
aatgccgtcgacaatgacacactcttcgaacagctgaccatcacgactgacatgatcgac
ggaggactgttcgataccatcacctttaccacggactcgtcgtccggttccaactgggaa
ctgcgctatgttgaggctgaatacggcctggacacctcgtttacctatgtccccgtcgat
aatgacggtctggctggaaacgagtcctcggtttccattgaaattacgccggatgtcctg
acaaccaacgagccgacaagtgacagctttgccacccatgttgatcacgggcaatccgtt
gcaatcgacttcggcggccatgtgctcgacgtggaagacggttcggtgaacaccgtggtt
atcaagagcctgcccactgacggttccctggtcgatgatcacggcaatgccatcgtggtt
ggacaagaatataatgtaaacgacatcaattatgtcgcttccgacagtaccgacggaccg
gatgctacgggagttttcctcggcacccgccatgagggcgaccagagcattgacaactgg
ggaacggaagtggatgccaacacccgtgtcctgcatgtatctgacaccatctccgtgacc
gtctccagcaacgatggagccttgacccagtacaatgctgagaatcccaaccacatgggg
gtcggcatcggtgacaatgacggaaacggcatcaacagcggcgaagtgatcacagttgcc
tttgacggagcacaggtctctaccgcagaagtcacttttgacggtctcggctctgacttt
gccgagggaggcagtgttggagccactgccacatgggttgcctacaacggagacaccatc
gtggcccagggcgaagtatacgcccctgaatcggggctggaaagcgtcgtcaccatcggc
caggatatcctcaacggtcaactctttgatcgtatcgaattctccacggattccgactct
tcttcaaattgggagctgcgctccgtcgatgctgaattcggcagcggggattcctttgag
tactatcctgttgattccgatggcctgacagggaacgcctccacagtcacgctcacgtat
gatgcaccggataccatcacgcatgaagccccggtcttggatctcggtgacggcagtcag
gtcgtttacgatggcgaacatgccggctacaccaatatgctcggcatatactttgtggaa
gacggcactccgagcaatcctgagatcattctcactgacagcaaggatgtgagcattctc
aataatgtgatcgcgaccttcgaaggagaccaggacgtccatttcttcctggtttccgat
gcaggcggagaattctccgccgaccaactcggatcggaaatgcattttgtgatggataac
gggaattgggcactggccatgggcaacgacaccgtggatgttcaattcgacatagcccag
ttcaacccgaacggcgaagaagcctccttccggttcgaaaccaacgccgacggctccctg
tcggtggaagttgatgaccaattgggcacatgggacgacgatgatttcgatgatatctca
gccactgtgaatcttgtggatgacggcacatccgactacgccaccacatgggttgaaaat
cacgaaggcgtttccattgccggagacgtggccatcagcgatgaggactccagccggatg
tccagcgcgaccattatcctcaccaacgcccacgatggtgacattctcaacacggacgcc
ctgcccgacggcatcaccgcacaggttgttgacaacggcgacaccatcacggtcacgctg
tccggaaccatgcccatcagcgattaccaggaagccattcactccatcacctatgagaac
catgcctcatctgaccccgacgtgacggaccgtgtcgttgaagtaaccctcttcgacgaa
tccggcacttccagcaacgtggcaacaacgacaatctctgtcgttgacgtggatgtctcg
agccagatcgtgctcaacccgagctttgaatcctcagacagaatttacggcagctggaca
cagactgatggcgttgacaactggagcaatccttctgacggcgatattgaaatctggaat
aaccatatgggcaagaacgcagctgacgggaaccagttcattgaattggattccgccaat
gacgtggactccctgtcacagatcatcgcgaccaaggcaggagagatggtcaacctgagc
ttcgcgtttgccccgcgtcccgggacagctggtgaaaccaacgactttgatgtctcattg
ggaggcgtgctggttgccactgtcgcctggaatgccgttgaccatgtctttgaggtcaca
caacccggttccacagaggtcacaaccttcgattacgacggttccgactccggctggaac
accataagcctggatgtccaggcaccgaccgatcatgcggagctgctcttcaccgaacat
ggcgatcataatgacacattcggcattctgctagatgatgttcaggttcaccgcgaattc
gattccgaaatcctcggcacccatcatgcggatacgctgctcggcacccccggagatgac
ttcatcatggctgtggacaataccagtgacagcggacaccacaatcactacggctctcat
atgacaggtgattacatagatggtggagccggacacgacgccatatacggcggagatggc
aacgacattctgatcggcggagaaggaaacgacttcatatacggcggaggcggcaacgac
accattgacgctggctccggcaatgacttcatcaatgccggaagcggccataatgtcgtc
accactggcgatggaaatgacacactgttcatcgaccagtctgctctcaaccagtcgcac
agcgaaatcgtggtcaatgacttcgttgtcggcaccgatgctctggaaatgggtgacgga
atgtcggtcaaggatattaccacggtaacggaaaattccatccaatatactcaggttctg
gtgggtgacgaccacgataataatgtcatcgtcaagctcctgggtgtgactcagaccgat
cttgacagccactccaccggggttgatgccgcaacccattcagatgacctcattcagtac
atgatcgactccggtcacaactcataa
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integrated database retrieval system
