Danaus plexippus (monarch butterfly): KGM_200625
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Entry
KGM_200625 CDS
T04344
Name
(GenBank) pre-mRNA-processing factor 6 like protein
KO
K12855
pre-mRNA-processing factor 6
Organism
dpl
Danaus plexippus (monarch butterfly)
Pathway
dpl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dpl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
KGM_200625
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dpl03041
]
KGM_200625
Spliceosome [BR:
dpl03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
KGM_200625
Complex C
U5 SnRNP specific factors
KGM_200625
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP1_N
TPR_14
TPR_19
HAT_PRP39_N
Suf
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
TPR_17
TPR_CcmH_CycH
ARM_TT21_2nd
TPR_21
Motif
Other DBs
NCBI-ProteinID:
OWR46558
UniProt:
A0A212EYI1
LinkDB
All DBs
Position
Unknown
AA seq
956 aa
AA seq
DB search
MSVPPQAFVNKNKKHFLGIPAPLGYVAGVGRGATGFTTRSDIGPARDANDVSDDRHAPPA
AKRKKTEEEDDDEDLNDSNYDEFSGYSGSLFSKDPYDKDDAEADAIYESIDKRMDEKRKE
YREKRLKEDLERYRQERQFSDLKRELKMVSEDEWAAIPEVGDARNRKQRNPRAEKFTPLP
DSVLSRNLGGESSSTIDPSSGLASMMPGVMTPGMLTPSGDLDLRKIGQARNTLMTVKLSQ
VSDSVSGQTVVDPKGYLTDLQSMIPTYGGDINDIKKARLLLKSVRETNPNHPPAWIASAR
LEEVTGKIQSARNLIMKGCEVNPSSEELWLEAARLQPPDTARAVIAHAARNLPHSVRVWV
KAAELEQEPKAKRRVYRKALEHIPNSVRLWKAAVELENPEDARILLSRAVECCPTSVELW
LALARLETYENARKVLNKARENIPTDRQIWVTAAKLEEAQGNTHMVEKIIDRAITSLSAN
GVEINREHWFKEAMEAEKSGAVHTCQVIGHGIEPEDQKHTWMEDADACANEGAYECARAV
YGYALSVFPSKKSIWLRAAYLEKQHGTRATLEALLQRAVAHCPKSEVLWLMGAKSKWLAG
DVRAARQILSLAFQANPNSEEIWLAAVKLESENKEYDRARRLLEKARASAPTPRVMIKSA
KLEWALNKLDVALNLLSEAITIFGDYAKLHMMKGQIEEQMGRDSDAHNTYTQGLKKCATS
VPMWILLSRLEEKLKHVTKARSVLEKARLRNQKNAELWLESVRLEQRAGCVEAAGSLLAK
ALQECPTAGRLWALAVFMEPRPQRKTKSVDALKKCEHDAHVLLAVSQLFWTERKLNKCRE
WFNRTVDALKKCEHDAHVLLAVSQLFWTERKLNKCREWFNRTVKIDPDLGDAWAYFYKFE
LHHGNEQQQEDVKNRCKAAEPHHGENWCKVSKDIANWCYNTEQILLLVAKNLPVPT
NT seq
2871 nt
NT seq
+upstream
nt +downstream
nt
atgtcagttcctccgcaagcatttgtaaacaaaaacaaaaaacattttcttggtattccg
gcacctcttggttatgtggctggtgttggtagaggagctacaggttttactactagatca
gatattggacccgccagagacgccaatgacgtatctgatgatcgtcatgcacccccagca
gccaagcgaaaaaaaactgaagaggaagacgatgatgaagacttgaatgactctaattat
gacgaattttcaggttatagtggctctctcttttcaaaggatccatatgacaaagatgat
gcagaggcagatgctatatatgagtcaattgataaacgaatggatgaaaaaagaaaagag
tatagagagaagagacttaaagaggatttggagagatatcgccaagagaggcaattttct
gatctcaaacgggaattgaaaatggtgtcggaggatgaatgggctgctataccggaagtt
ggtgacgcgaggaacaggaagcaaaggaatccaagagcggagaaatttactcctttacca
gatagtgtgttatctaggaatcttggtggagagtctagttcaacaattgatcctagttca
ggcttagcttctatgatgccgggggttatgacacctggaatgctgacaccttcaggtgat
ctcgatctacgtaagataggtcaagcgaggaacactttaatgacggtgaaattgtcacaa
gtctccgactctgtgagcggtcagacagtggtggaccctaaaggttacttaactgactta
cagtccatgatacctacctatggcggtgacattaatgacatcaaaaaggccaggctgctc
ctcaagtcggtgagggaaaccaatcctaaccatccaccagcttggattgctagtgctaga
ttagaagaagttactggtaaaatccagtcagcccgcaacctcataatgaagggttgtgag
gttaaccccagcagtgaagagctctggttggaagcggctcgtctacaaccaccggataca
gctcgggcggttatagcacacgccgcccgcaacctgcctcatagtgtacgagtttgggtg
aaggcggctgaactggaacaagaaccaaaggctaaacgtcgtgtttacagaaaggcgttg
gagcatataccaaattcagtgcgtttgtggaaagcggccgtcgaattggagaaccctgaa
gatgctaggatcctgctttcaagggccgtggagtgttgtccgacgagcgtagaactatgg
ctggctctggctagactggaaacatatgaaaatgcaagaaaagtactaaataaggcacgt
gaaaatattcccaccgatagacagatctgggtaacagctgctaaacttgaagaggctcaa
ggcaacactcatatggtagaaaagattatagaccgtgccataacgtcgcttagtgctaat
ggcgttgaaataaacagagagcattggttcaaagaggcgatggaggctgagaaatctgga
gcagttcatacgtgtcaggtgatcggtcacggcattgaaccagaggatcaaaaacatact
tggatggaggatgctgatgcttgcgccaacgaaggtgcgtacgagtgtgcccgggcggtg
tatgggtacgcgctatcagttttcccctcgaagaagtccatctggctgagagccgcctac
ctcgagaagcagcatggtacgagggcgacgttggaggctctgttacagagggcggtcgct
cactgtcccaagagcgaagtcctatggctcatgggggcgaagtccaagtggctagcgggt
gacgtgagagcggctagacagatcctgtcgttagctttccaagccaatcctaactcggag
gagatctggctggccgctgtcaaactggagagcgagaacaaagaatatgatcgagccagg
aggttgttggagaaagccagagcgtccgcacccacacctagggtcatgataaaatcagca
aaactagaatgggctttgaacaaattagacgtagccctgaacctgctgtcagaagctatc
acaatatttggggattacgcgaagctacacatgatgaaaggacagatagaggagcagatg
gggagggatagtgacgcacacaacacgtacacacaagggttgaagaagtgcgctaccagt
gtccctatgtggatactgctgtcgagattggaagaaaaactcaaacacgtcaccaaagcc
agatctgtgttggagaaggcgcgtctcaggaatcagaagaacgctgagttatggttggag
agtgttcgcctggaacagcgagctggttgtgtggaagcggccggctccttgttggcgaag
gcgctccaggagtgtcctacggccggcagactgtgggccctcgccgtcttcatggagccc
cgcccgcagaggaagactaagagtgtggatgccctgaagaaatgtgaacacgacgctcac
gtcctgctggcggtgtcgcagctgttctggacggagaggaaattaaataaatgcagggaa
tggttcaacagaactgtggatgctctgaagaaatgtgaacacgacgctcacgtcctgctg
gcggtgtcgcagctgttctggacggagaggaaattaaataaatgcagagaatggttcaac
agaactgtgaaaatcgacccggatctcggtgacgcttgggcttacttctacaaattcgaa
ttgcaccacggcaacgaacagcaacaggaagacgtgaagaacaggtgcaaggccgccgaa
ccccaccacggagagaactggtgcaaggtctccaaagacatagccaactggtgttacaat
acagaacagatattgttactggtggctaagaatctacccgtgcccacgtag
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