KEGG   Danaus plexippus (monarch butterfly): KGM_204627
Entry
KGM_204627        CDS       T04344                                 
Name
(GenBank) replication factor C subunit 2
  KO
K10755  replication factor C subunit 2/4
Organism
dpl  Danaus plexippus (monarch butterfly)
Pathway
dpl03030  DNA replication
dpl03410  Base excision repair
dpl03420  Nucleotide excision repair
dpl03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:dpl00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    KGM_204627
   03410 Base excision repair
    KGM_204627
   03420 Nucleotide excision repair
    KGM_204627
   03430 Mismatch repair
    KGM_204627
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:dpl03032]
    KGM_204627
   03036 Chromosome and associated proteins [BR:dpl03036]
    KGM_204627
   03400 DNA repair and recombination proteins [BR:dpl03400]
    KGM_204627
DNA replication proteins [BR:dpl03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    KGM_204627
  DNA Replication Termination Factors
   ELG1-RFC complex
    KGM_204627
Chromosome and associated proteins [BR:dpl03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    KGM_204627
DNA repair and recombination proteins [BR:dpl03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     KGM_204627
  Check point factors
   HRAD17(Rad24)-RFC complex
    KGM_204627
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 AAA_14 AAA_22 AAA_16 Rad17 RuvB_N AAA_24 Mg_chelatase Viral_helicase1 AAA_11 RCF1-5-like_lid AAA_19 MeaB nSTAND3 IstB_IS21 AAA_18 AAA_assoc_2 ABC_tran NTPase_1 AAA_5 RNA_helicase AAA_28 AAA_23 AAA_25 AAA_29 AAA_3
Other DBs
NCBI-ProteinID: OWR45752
UniProt: A0A212EW79
LinkDB
Position
Unknown
AA seq 349 aa
MSDDDVTIMEVDEVDPKPSKSVTVQSKVTSHLPWIEKYRPQTFTDIVGNEDTVSRLAVFA
RTGNAPNIIIAGPPGVGKTTTILCLARVLLGPAFKDAVLELNASNDRGIDVVRNKIKMFA
QQKVTLPPGRHKIVILDEADSMTDGAQQALRRTMELYSSTTRFALAANNSEKIIEPIQSR
CAVLRYTKLSDAQILAKVIEVCEKEDLSYTEEGVNAVVFTAQGDLRAALNNLQSTAQGFA
HVSPDNVFKVCDEPHPMLVKTMLEACTRKDIYEAYKVIAKLCRLGYATEDILSNMFRVSK
TLSVSEDVRLGLIKQIGLTQMRAADGLTSQLQLAALLARMCGGKGVDEE
NT seq 1050 nt   +upstreamnt  +downstreamnt
atgagtgacgacgacgttactataatggaagttgacgaggtagatcctaagcccagcaag
tcggtaacagttcaaagtaaagttacttcacatttaccctggatagaaaaatacagaccg
cagacatttactgatatagtgggcaacgaggacacggtgtcacgtctggcggtgtttgct
cgtactggcaacgcacctaatataataatagcgggaccgcccggtgtaggtaaaaccaca
acaatcctgtgtttagctcgcgtacttctcggtcccgctttcaaagatgctgttcttgaa
ttaaacgcatcaaatgatcgaggtatcgatgttgtccgtaataaaatcaaaatgtttgct
caacagaaggtgacattacctcctggaagacataaaatagttattttggatgaggctgac
agcatgacggatggcgcccagcaggctctgaggcgtaccatggaactttattccagcacc
acgcgctttgctctagcagctaacaacagtgagaagattattgaaccaatccagtctcgt
tgtgctgttttacgctataccaaactgagcgatgcccagatactagctaaggttattgaa
gtctgtgaaaaagaagacttatcctacacagaggaaggagttaatgctgttgttttcacc
gcccagggagacttgagagccgcactaaataacctgcagtccacagcacagggctttgcc
catgtcagtcctgataatgtgttcaaggtgtgcgatgaaccgcaccctatgctcgtaaag
acgatgttagaggcctgcacaagaaaggatatttatgaagcttataaggttatagcaaag
ctttgtcgtctcggttatgctacagaggatatattgagtaacatgttccgtgtgagcaag
actctgtctgtgtcggaagatgtacgtctagggctgatcaaacagatcggactcacacag
atgagggcggcagacgggctcacttcacagctacaactggcagccctactggcaaggatg
tgtggagggaagggggtggatgaagagtaa

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