KEGG   Danaus plexippus (monarch butterfly): KGM_204933
Entry
KGM_204933        CDS       T04344                                 
Name
(GenBank) hypothetical protein
  KO
K12571  PAB-dependent poly(A)-specific ribonuclease subunit 2 [EC:3.1.13.4]
Organism
dpl  Danaus plexippus (monarch butterfly)
Pathway
dpl03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:dpl00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    KGM_204933
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dpl03019]
    KGM_204933
Enzymes [BR:dpl01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.4  poly(A)-specific ribonuclease
     KGM_204933
Messenger RNA biogenesis [BR:dpl03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     KGM_204933
  mRNA degradation factors
   3'-5' decay
    Pan complex
     KGM_204933
SSDB
Motif
Pfam: UCH_1 PAN2_N UCH zf-CCCH_2 EIF3I T6PP_N
Other DBs
NCBI-ProteinID: OWR53499
UniProt: A0A212FIE1
LinkDB
Position
Unknown
AA seq 922 aa
MAFHYSDGNVSSEHLMNDHYQPDYSQPYVLQSQEAEYELRSNVLVDGGDRFGVSAAVFDK
YEELIWMGNQGGHVTSYYGPTMQKYTSFQVHATEEIRDILTVDKGIYLLTKSILRHQIRR
GIPKFTHNTEIFLVLEQKHIYADLKNITGQEYRILRMQIILSCEKILKRNLLAWEQEALL
YPRICADVCCREWRQEKLTDCVNCGQVSYCSDHPEHLPSSHQRWCKSYALYQKLVLHHQT
FGKLMPKLPKKLFENWQIPDNMNEVDTQNSLCSVMDVSSTSQAMVFGDQAGRLHLFSPQH
NNEPVFNNFSRATEFADPPPNLPYASFEDNSFSYSSVPLPPLASGSKWFNELPPEFFTNV
YRKPKPIDQEVLRTMKMQGPIGYAPNPRTHRRNQMPYIEEDLEDIENPGVDRRNPQQPIP
RYYLKTELRFDRNGENCEQENINETGLPGIQSTVPNSYCNPMLQVLYYIPPLKATLLAHT
CAKEFCLSCELGFLFRALDSSGGAACRATNFLRAFRTVPEAAALGLILPERTTPRIDVAT
LVQSWNRFILHQMHAEILETRRKEKELAYLTQRIRLVRPGNKAVQKLLNGEIDEFELDMQ
FLDPTLAEKKDYDENWHNDTTFLNRPPQAECEELLEAPQTPDIEEPPPPIEDSEISQLFA
IARQQINRCMKCNKEEERDTVVLACALQYSAGVGFLELVSASLASRRATPAWCETCARFT
PTTQVARILRLPPILAINCGGMTAQEKAFWSRGGQKPTPEVIKRGGSGKPCRYGLHCARP
GCRFKHPESRPSATPQSNAQDNGCILPHHLNIRLQPDGEVVITDKANATTDLKSDFKRRY
QCENYSLHAAVVCVEDNPRNLVAYVKIPDEKGDQRWYLFNDLNIVQVSPEELLVEVALCF
VLQHTEGCWDLIASAYVWAVRN
NT seq 2769 nt   +upstreamnt  +downstreamnt
atggcgtttcactattcggatggtaacgtttcttccgaacatcttatgaatgatcattat
caaccagattattcccaaccatatgtcttgcaaagtcaagaggcagaatatgagttgcgt
agcaatgtgcttgttgacggtggagatagattcggtgtatcagctgctgtctttgataag
tatgaggagttgatatggatgggaaaccaaggtggccatgtaacatcatattatgggcca
actatgcaaaagtatacttccttccaagttcatgcgactgaagaaatacgagacatactg
acagttgacaaaggcatctacttgcttacaaaatctattctacgtcatcaaatacgcaga
ggaataccaaaatttactcataatactgaaatatttttggttttagaacaaaaacatatt
tacgcggacttgaaaaacataaccggccaggaataccgaattttaagaatgcaaataatt
ttatcttgcgaaaagatattaaaaagaaacttactggcctgggaacaggaggcacttctt
tatcctagaatctgcgcagacgtttgctgtagggaatggcggcaagagaagcttactgac
tgtgtgaattgtggacaggtttcatactgttctgaccatccggaacatttgccttcatct
catcaacgttggtgcaaatcgtatgctctgtatcaaaaattggttttgcaccatcagacc
tttggtaaattgatgccaaagttgccgaagaaactgttcgaaaattggcaaattccagat
aacatgaacgaagttgacactcagaactccttgtgcagtgtgatggatgtgtcttccacg
agtcaggctatggtgtttggagatcaggccggtcgtttgcatcttttctctcctcaacac
aataacgaacccgtcttcaataacttttccagagccaccgagttcgctgaccctcctccc
aacctgccgtacgccagttttgaagacaactctttctcgtactcgtcagttccgctgccg
ccgctcgcctccggctccaaatggttcaatgaactgccacccgaattcttcacgaacgta
tacagaaagcctaagccgattgatcaagaagtattacgaacaatgaagatgcagggtccg
ataggttacgcgcctaatccaaggacgcacagacgtaatcagatgccatacatagaagaa
gatttggaagacatcgaaaatccaggagtagatcgtcgtaacccgcagcaaccaataccc
agatattatttgaagacggagttacgtttcgatcgaaatggagaaaattgcgaacaagaa
aatattaacgaaactggtctgccgggcatacagagcactgtgcccaattcatattgcaat
ccaatgttacaggttttatattacataccgccgttaaaagccacattattggctcacact
tgcgccaaggagttctgtctcagctgcgaattaggttttctattccgtgccctggactcg
tccgggggcgccgcgtgtcgcgctactaacttcctccgagcgttcagaacggtgccggag
gctgcggcgctcggactcatcctgcctgaacgcaccacgcccaggatagatgtcgccacc
ctcgttcagagttggaaccgtttcatcttacatcaaatgcacgcggagatactggaaacg
cggaggaaggaaaaggaactggcgtatctgacgcagaggataagattagtgagacccggc
aacaaggcggtgcagaagctgttgaacggagaaatagacgagttcgagttggacatgcag
ttcctggaccccacgttggctgagaagaaagactacgacgagaactggcacaatgacacc
acatttctgaaccgtccgcctcaagcggagtgtgaggagctgttagaagctccacagacg
cccgacatagaggaacccccacctccgatagaggactcggagatatcacaactgtttgcg
atcgcgaggcaacagattaaccgatgcatgaaatgcaacaaggaggaagaacgcgataca
gtagtattggcatgcgctctgcagtatagcgcgggggtggggtttttagagctagtgagc
gcttcgcttgcctcccggcgcgccacgcccgcctggtgtgagacctgcgcgcggttcaca
cccaccacgcaggtcgctaggatactcagattgccacccatactcgcaattaactgtggc
ggaatgacagcacaggaaaaagcattctggtcgagaggtggacaaaaaccaacgccagaa
gttattaaaagagggggcagtgggaagccttgtaggtacgggctacactgtgcaagacct
ggctgtagatttaaacatccggagagcagaccgtccgcgacccctcagagcaacgctcaa
gataatggctgtatactcccacatcacctgaacattagactgcaaccggacggtgaagtg
gtcataacagataaggccaacgccaccactgacttgaagtccgacttcaagcgccgttac
cagtgtgagaactacagtcttcatgccgcggtggtgtgcgtggaggacaatccgaggaat
ttggttgcctacgttaagataccggatgagaaaggagatcagaggtggtacctgttcaat
gatttgaatatagtccaagtaagtccggaggagttgctggtggaagtggccttgtgtttt
gttctacagcacacagagggctgttgggacctcatagcatcagcgtatgtatgggccgtc
cggaattaa

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