Danaus plexippus (monarch butterfly): KGM_204933
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Entry
KGM_204933 CDS
T04344
Name
(GenBank) hypothetical protein
KO
K12571
PAB-dependent poly(A)-specific ribonuclease subunit 2 [EC:
3.1.13.4
]
Organism
dpl
Danaus plexippus (monarch butterfly)
Pathway
dpl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dpl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KGM_204933
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dpl03019
]
KGM_204933
Enzymes [BR:
dpl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
KGM_204933
Messenger RNA biogenesis [BR:
dpl03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
KGM_204933
mRNA degradation factors
3'-5' decay
Pan complex
KGM_204933
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH_1
PAN2_N
UCH
zf-CCCH_2
EIF3I
T6PP_N
Motif
Other DBs
NCBI-ProteinID:
OWR53499
UniProt:
A0A212FIE1
LinkDB
All DBs
Position
Unknown
AA seq
922 aa
AA seq
DB search
MAFHYSDGNVSSEHLMNDHYQPDYSQPYVLQSQEAEYELRSNVLVDGGDRFGVSAAVFDK
YEELIWMGNQGGHVTSYYGPTMQKYTSFQVHATEEIRDILTVDKGIYLLTKSILRHQIRR
GIPKFTHNTEIFLVLEQKHIYADLKNITGQEYRILRMQIILSCEKILKRNLLAWEQEALL
YPRICADVCCREWRQEKLTDCVNCGQVSYCSDHPEHLPSSHQRWCKSYALYQKLVLHHQT
FGKLMPKLPKKLFENWQIPDNMNEVDTQNSLCSVMDVSSTSQAMVFGDQAGRLHLFSPQH
NNEPVFNNFSRATEFADPPPNLPYASFEDNSFSYSSVPLPPLASGSKWFNELPPEFFTNV
YRKPKPIDQEVLRTMKMQGPIGYAPNPRTHRRNQMPYIEEDLEDIENPGVDRRNPQQPIP
RYYLKTELRFDRNGENCEQENINETGLPGIQSTVPNSYCNPMLQVLYYIPPLKATLLAHT
CAKEFCLSCELGFLFRALDSSGGAACRATNFLRAFRTVPEAAALGLILPERTTPRIDVAT
LVQSWNRFILHQMHAEILETRRKEKELAYLTQRIRLVRPGNKAVQKLLNGEIDEFELDMQ
FLDPTLAEKKDYDENWHNDTTFLNRPPQAECEELLEAPQTPDIEEPPPPIEDSEISQLFA
IARQQINRCMKCNKEEERDTVVLACALQYSAGVGFLELVSASLASRRATPAWCETCARFT
PTTQVARILRLPPILAINCGGMTAQEKAFWSRGGQKPTPEVIKRGGSGKPCRYGLHCARP
GCRFKHPESRPSATPQSNAQDNGCILPHHLNIRLQPDGEVVITDKANATTDLKSDFKRRY
QCENYSLHAAVVCVEDNPRNLVAYVKIPDEKGDQRWYLFNDLNIVQVSPEELLVEVALCF
VLQHTEGCWDLIASAYVWAVRN
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
atggcgtttcactattcggatggtaacgtttcttccgaacatcttatgaatgatcattat
caaccagattattcccaaccatatgtcttgcaaagtcaagaggcagaatatgagttgcgt
agcaatgtgcttgttgacggtggagatagattcggtgtatcagctgctgtctttgataag
tatgaggagttgatatggatgggaaaccaaggtggccatgtaacatcatattatgggcca
actatgcaaaagtatacttccttccaagttcatgcgactgaagaaatacgagacatactg
acagttgacaaaggcatctacttgcttacaaaatctattctacgtcatcaaatacgcaga
ggaataccaaaatttactcataatactgaaatatttttggttttagaacaaaaacatatt
tacgcggacttgaaaaacataaccggccaggaataccgaattttaagaatgcaaataatt
ttatcttgcgaaaagatattaaaaagaaacttactggcctgggaacaggaggcacttctt
tatcctagaatctgcgcagacgtttgctgtagggaatggcggcaagagaagcttactgac
tgtgtgaattgtggacaggtttcatactgttctgaccatccggaacatttgccttcatct
catcaacgttggtgcaaatcgtatgctctgtatcaaaaattggttttgcaccatcagacc
tttggtaaattgatgccaaagttgccgaagaaactgttcgaaaattggcaaattccagat
aacatgaacgaagttgacactcagaactccttgtgcagtgtgatggatgtgtcttccacg
agtcaggctatggtgtttggagatcaggccggtcgtttgcatcttttctctcctcaacac
aataacgaacccgtcttcaataacttttccagagccaccgagttcgctgaccctcctccc
aacctgccgtacgccagttttgaagacaactctttctcgtactcgtcagttccgctgccg
ccgctcgcctccggctccaaatggttcaatgaactgccacccgaattcttcacgaacgta
tacagaaagcctaagccgattgatcaagaagtattacgaacaatgaagatgcagggtccg
ataggttacgcgcctaatccaaggacgcacagacgtaatcagatgccatacatagaagaa
gatttggaagacatcgaaaatccaggagtagatcgtcgtaacccgcagcaaccaataccc
agatattatttgaagacggagttacgtttcgatcgaaatggagaaaattgcgaacaagaa
aatattaacgaaactggtctgccgggcatacagagcactgtgcccaattcatattgcaat
ccaatgttacaggttttatattacataccgccgttaaaagccacattattggctcacact
tgcgccaaggagttctgtctcagctgcgaattaggttttctattccgtgccctggactcg
tccgggggcgccgcgtgtcgcgctactaacttcctccgagcgttcagaacggtgccggag
gctgcggcgctcggactcatcctgcctgaacgcaccacgcccaggatagatgtcgccacc
ctcgttcagagttggaaccgtttcatcttacatcaaatgcacgcggagatactggaaacg
cggaggaaggaaaaggaactggcgtatctgacgcagaggataagattagtgagacccggc
aacaaggcggtgcagaagctgttgaacggagaaatagacgagttcgagttggacatgcag
ttcctggaccccacgttggctgagaagaaagactacgacgagaactggcacaatgacacc
acatttctgaaccgtccgcctcaagcggagtgtgaggagctgttagaagctccacagacg
cccgacatagaggaacccccacctccgatagaggactcggagatatcacaactgtttgcg
atcgcgaggcaacagattaaccgatgcatgaaatgcaacaaggaggaagaacgcgataca
gtagtattggcatgcgctctgcagtatagcgcgggggtggggtttttagagctagtgagc
gcttcgcttgcctcccggcgcgccacgcccgcctggtgtgagacctgcgcgcggttcaca
cccaccacgcaggtcgctaggatactcagattgccacccatactcgcaattaactgtggc
ggaatgacagcacaggaaaaagcattctggtcgagaggtggacaaaaaccaacgccagaa
gttattaaaagagggggcagtgggaagccttgtaggtacgggctacactgtgcaagacct
ggctgtagatttaaacatccggagagcagaccgtccgcgacccctcagagcaacgctcaa
gataatggctgtatactcccacatcacctgaacattagactgcaaccggacggtgaagtg
gtcataacagataaggccaacgccaccactgacttgaagtccgacttcaagcgccgttac
cagtgtgagaactacagtcttcatgccgcggtggtgtgcgtggaggacaatccgaggaat
ttggttgcctacgttaagataccggatgagaaaggagatcagaggtggtacctgttcaat
gatttgaatatagtccaagtaagtccggaggagttgctggtggaagtggccttgtgtttt
gttctacagcacacagagggctgttgggacctcatagcatcagcgtatgtatgggccgtc
cggaattaa
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integrated database retrieval system