Danaus plexippus (monarch butterfly): KGM_204962
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Entry
KGM_204962 CDS
T04344
Name
(GenBank) suppressor of forked like protein
KO
K14408
cleavage stimulation factor subunit 3
Organism
dpl
Danaus plexippus (monarch butterfly)
Pathway
dpl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dpl00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
KGM_204962
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dpl03019
]
KGM_204962
Messenger RNA biogenesis [BR:
dpl03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
KGM_204962
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
NRDE-2
RB_A
NorB_cytochrome_c-like
Motif
Other DBs
NCBI-ProteinID:
OWR53995
UniProt:
A0A212FJS9
LinkDB
All DBs
Position
Unknown
AA seq
760 aa
AA seq
DB search
MNDENAEIDWGNERLSRAQRAVEANTYDVDSWSLLIREAQTRPINEVRTMYEKLITAFPT
TGRYWKIYIEQEMKARNFEKVEKLFQRCLMKILNIELWRLYLNYVKETKCMLPTYKEKMA
QAYDFALDKIGLDIHAYPIWNDYVTFLKAVEAVGSYAENQKISAVRKVYQRAVITPIIGI
ETLWKDYIAFEQGINTIIAERMAMERSREYMNARRVAKELETVTRGLNRNMPATPPTADR
EEMKQVELWKKYISWERSNPLRSEDTALVARRVMFAIEQCLLCLAHHPDVWHQAAQFLDH
SSKLLQEKGDSTAARLFSEEAGAVYERATSGPLKHSTLLHFAHADYEESRLHYNKVHQVY
TRYLDMADIEPTLAYVQYMKFARRAEGIKSARTVFKRAREDPRSRYHVFVAAALMEYYCS
KDKNIAFRIFELGLKKFSHIPEYVLCYIDYLSHLNEDNNTRVLFERVLSSGCLKPESSVD
IWNRFLEFESNIGDLVSIVKVEKRRQAVLEKIKEFEGKETAQLVDRYKFLDLYPCTIAEL
KSIGYTEVASMSNKSWALGGPLAGISPELAAVILGQKDNDPNKDIVRPDTSQMIPYKPKS
NPLPGEHPIPGTYKDNDPNKDIVRPDTSQMIPYKPKSNPLPGEHPIPGGSFPLPPAAAAL
CTAMPPPSSYRGPFVAVDMLIALFNRITLPDKPAAPTNENGCDTKLFELARSVHWIMDDD
TTKNNTARRRKLGSDSDDDELGAPPPLNDVYRQRQQKRVK
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atgaatgatgaaaatgcagagattgactggggtaatgagaggttaagccgagcccaacgc
gcggttgaagcgaacacgtatgatgttgattcgtggtctctcttgatacgcgaagcccaa
acccggcctataaatgaggtcagaacgatgtatgagaagctcattacagctttcccaaca
acagggaggtattggaagatttatatcgaacaggagatgaaagcgagaaattttgagaag
gtcgaaaagttgtttcagaggtgtctcatgaagattctaaacattgaactgtggaggcta
tacctaaactacgttaaggagaccaagtgcatgttgccgacatacaaagagaaaatggcg
caggcctacgacttcgcgttggacaaaataggtctggacatacacgcgtatcctatatgg
aacgattacgtaacattcttgaaggctgtcgaggctgttggctcttacgctgagaaccag
aagatatcagccgttaggaaggtataccagagagcggtcattaccccgataataggtatt
gagacgctgtggaaagactacatcgctttcgaacaaggaatcaacactatcatagctgag
cgtatggctatggagcgatcacgggaatatatgaacgcgaggagagtagccaaagaattg
gagacggtcaccaggggcttgaataggaacatgccggccaccccgcccaccgcagacagg
gaggagatgaagcaggtggagttgtggaagaagtacatatcctgggagcgctccaacccc
ctcaggtcggaggataccgctctcgtggccaggcgggtgatgttcgctatagaacagtgt
ctgctatgtctggcccaccacccggatgtatggcatcaggcggcgcagttcctcgaccat
tcatctaaattactgcaagaaaagggggattcgacagccgcccgtctgttctccgaggag
gccggtgcagtctacgagagagccacatccggtccgctcaaacattccaccttactgcac
ttcgctcacgccgactatgaggagagtcggctgcattacaacaaggtacaccaggtatac
actcgctatctggatatggcggacatcgaacccacgctggcctacgttcaatatatgaag
tttgcgagacgagctgaaggtatcaagtcggctaggacggtgttcaaacgagccagggaa
gacccgagatcccgttaccacgtgttcgtggcggccgccctcatggagtactactgctcc
aaagacaagaacattgctttcaggatatttgagttgggcctcaagaagttctcccacatt
ccggagtatgtgttgtgctacatcgactacctgtcacatttgaacgaggataacaacacc
cgcgtgttgttcgagcgcgtcctgtcatctggatgtctgaagccggagagttctgttgat
atctggaatagattcctggaatttgaatccaatattggggacctcgtcagtatagtgaag
gttgagaaacggaggcaggcggttctggaaaagatcaaagagtttgagggtaaggagacg
gctcagctcgtggacagatacaagttcctggatctctacccctgtactatagctgaactc
aagtccataggatacacagaggtagcatcaatgtcgaacaagtcctgggctctcggagga
ccgcttgctggcatctcaccagaattggccgctgtgatactaggacagaaagacaatgat
ccgaacaaggacatagttcgtccagacacaagtcaaatgataccctacaagccaaaatcg
aacccactccccggagagcatcctataccaggtacgtacaaagacaatgatccgaacaag
gacatagttcgtccagacacaagtcaaatgataccctacaagccaaagtccaacccactc
cccggagagcatcctataccgggcggttccttcccgctgcctcccgcggccgccgccctg
tgcacggcgatgcctcccccctccagctacagaggacccttcgtggcggtggacatgctg
atagcactcttcaacaggatcacactacccgacaaacccgctgccccgaccaatgagaac
ggctgtgacaccaaactgtttgagctggctcgctccgtccactggatcatggacgatgac
accaccaagaataatacggctcgcagaaggaagctgggttcggactcggatgacgacgag
ctgggcgcgccgccgcctctcaacgacgtctacagacagagacaacagaagagagtcaag
tga
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