Danaus plexippus (monarch butterfly): KGM_205460A
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Entry
KGM_205460A CDS
T04344
Name
(GenBank) Symplekin
KO
K06100
symplekin
Organism
dpl
Danaus plexippus (monarch butterfly)
Pathway
dpl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dpl00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
KGM_205460A
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dpl03021
]
KGM_205460A
03019 Messenger RNA biogenesis [BR:
dpl03019
]
KGM_205460A
Transcription machinery [BR:
dpl03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
KGM_205460A
Messenger RNA biogenesis [BR:
dpl03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
KGM_205460A
U7-dependent histone pre-mRNA processing factors
KGM_205460A
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SYMPK_PTA1_N
INTS1_R4
Adaptin_N
Motif
Other DBs
NCBI-ProteinID:
OWR51479
UniProt:
A0A212FCK9
LinkDB
All DBs
Position
Unknown
AA seq
913 aa
AA seq
DB search
MSSKYHPSSGGTAQTQLVQWINEAGMSEGNKKVNLLRKIIEVLLHQAPQMVPVYMDNILS
CVNDKSADVKRQVVAFIEELSKSYPEYLPKIIGQLQLLVIDTVIAVQKRAIQAASLVYRN
VLLWICKGTSEMKDMQYVWEHLSELKLLILNMIDSDNEGIRTHSIKFLEEVVVLQSPHAN
DDDDFSLDCLPSHLPFLNRKAMEEESDHIFQLLLKFHNSQHISSVNLMACMTTLCIVAKL
RPKYMSSVVKALNDLHTTLPPTLSQSQVNSVRKHLKMQLLILVKHPSSYDMMPQLTQLLM
DIGMTPQEINKALPRDRRNKRLGELRASENPAKRFRVDSPQSTLGSDSNSNSRSEFNLFD
DDNSQQGSQQSITKASCTEESILDGLNSLENVVNLVVTTLINNLPTEMPTSFILAYKPIP
NSGSKVQKQSLAKMMMALIKDEPLPMPTTMKSLDTTTKIPLLRDDDDKINLKNAVAKLQE
STKVDKQIENAVSKLMEETRQEHLKEEERKNKDKEKPVAPPTPSIPKLKQKVKLLKLQEL
TRPIPKEIKEKLMIQAVERILRAEKESVIGGAAQIRTKFITIFASSYTPEIRELVLNYIL
EDPLNRIDLALSWLYEEYAYMQGFNRHPVTLQPKLHEKHGENYNQLLCALITQISERGDP
VMEGSKDVLLRKVYSEAPVVTDEAVDYLKHLVTEEKSATVALELLEELCLLRPPRAHKFV
AALVCHVLSENEEIRNIALKSSTKIYKHSTDAAKKVIEKHAMLYLGFISLSTPPQELYGN
RHASRPWSDDLYKMCLNLVMALFPEKEDVIIEIARVYGTTGAEAKRCVLRQLEVPVRALA
ASEPPGHLSPALAALLDACPRGAETLLTRIVHVLTDKYPPSPELVSRVRELYATRVSDVR
FLIPVLNGLTKKE
NT seq
2739 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagtaaatatcacccaagcagtggcggtaccgctcaaacacagctagtacaatgg
ataaacgaggcaggaatgtcggagggcaacaaaaaggtgaatttgttgcgaaaaattata
gaggtgttattacatcaagcacctcaaatggtgccagtttatatggataacattctaagt
tgcgtcaatgataaatctgctgatgttaaaaggcaggttgtcgcatttatcgaagaatta
agcaaatcatatcctgaatatcttcctaaaataattggtcagctgcaattactggtgata
gatacggttattgcggtacagaagagggccattcaggcggcgagcctggtttacagaaat
gtcctcctttggatatgtaaaggaacctcggaaatgaaagacatgcaatatgtttgggaa
catttatccgaattaaagcttcttattctcaatatgatagatagtgacaatgaaggtata
aggacacattcaatcaagttcttggaggaagttgttgtacttcaaagtcctcatgcaaat
gatgacgatgactttagtttggactgtttaccgtcacacctgccattcctcaacagaaag
gccatggaagaagagtccgaccatattttccaattactgttaaaattccacaactcgcaa
catatatcaagcgttaacctcatggcttgtatgacaacgttatgcatagtggcgaaactt
agaccaaaatatatgtcgagtgtggtgaaagctttaaacgacctgcacacgacactacca
cctacattatcacagtcacaggtgaattcagtgcggaaacacctcaagatgcagctactg
atattggtcaaacatccatcctcatatgacatgatgccgcaattgacgcagttgctcatg
gacattggaatgaccccacaagaaataaataaagctctacctagagacagaaggaacaaa
cgattgggagagttgagggcgtcagaaaatccagcaaaaagattcagggttgactcgcct
cagagcaccttgggcagcgatagcaacagtaacagcagaagtgaattcaatttgtttgat
gatgacaacagccagcagggcagccaacagagtataaccaaagcatcctgtacagaagaa
tcaattttagatggtctgaatagtttagaaaatgtcgtcaatctggttgtgacaaccctg
attaataacctgccgactgaaatgcccactagtttcatcttggcttataaacctattcca
aattcgggaagcaaggtccagaagcaaagtcttgctaaaatgatgatggcattgatcaaa
gacgaaccattgccaatgcctaccaccatgaagtctttggatacaaccacaaaaatccca
ttactgagagacgacgacgataaaatcaatctaaagaacgcggtcgcaaagctacaggag
tccaccaaagtagacaagcaaatagaaaatgctgtatcgaaactgatggaagaaactaga
caggagcatctcaaagaagaggagagaaagaataaggataaagaaaaaccagtcgctcca
ccaacgccatctataccgaaattaaaacagaaagtgaaactattaaaactccaagaacta
actcgacccataccaaaggaaattaaagagaaactgatgattcaagccgtggaaagaata
ttgcgagccgagaaagagagcgttatcgggggagcggctcaaataagaacgaaattcatc
acgatattcgcatcaagttacactccggagatacgagaactggtcctcaactacatactg
gaagatccgttaaacagaatcgacctggcattatcctggctgtacgaagaatacgcgtac
atgcaaggcttcaaccggcatccggtgacgctgcagcccaaactgcacgaaaaacacggc
gaaaactacaaccagctgctatgcgctctcatcacgcagatatcagagagaggggatccg
gtgatggaagggagtaaggacgttctgctgaggaaggtttactccgaagcgcccgtagtc
accgacgaggcggtggactacttgaagcatctggtcactgaggaaaagtcagcgacggta
gccctggaactgctcgaggagttgtgtctgctaagaccacctagggcgcacaaatttgtt
gccgccctggtatgtcacgtgttgagtgaaaacgaggaaattcgcaatatagccttgaaa
tcgtcaaccaaaatctacaaacacagtacggacgccgctaagaaggttatagagaaacac
gctatgttgtacctcggctttatctcgctgtcaacgccgccccaagagttgtatggcaac
agacacgcgagcagaccctggtccgacgacttgtataaaatgtgcctcaatctggtcatg
gcgttgttcccagagaaggaagacgtgatcattgagatcgcccgcgtctacggaaccaca
ggcgctgaggcgaagcgctgtgtgctgcgacagctggaagtgcctgtgcgtgctctggcc
gcctcagagcctcctggacacctgtcacctgcgctcgcagcactgctggatgcgtgcccg
cgcggcgccgagacgctactgacgcggatcgtgcacgtgcttactgataaatacccgccg
agccccgaactggtgtctcgtgtccgcgagctgtacgcgacccgagtctcagatgtgcgg
ttccttataccggtgctgaatggacttactaagaaggag
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