KEGG   Danaus plexippus (monarch butterfly): KGM_205460B
Entry
KGM_205460B       CDS       T04344                                 
Name
(GenBank) Symplekin
  KO
K06100  symplekin
Organism
dpl  Danaus plexippus (monarch butterfly)
Pathway
dpl03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:dpl00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    KGM_205460B
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:dpl03021]
    KGM_205460B
   03019 Messenger RNA biogenesis [BR:dpl03019]
    KGM_205460B
Transcription machinery [BR:dpl03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     KGM_205460B
Messenger RNA biogenesis [BR:dpl03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage stimulation factor (CSTF) complex
     KGM_205460B
    U7-dependent histone pre-mRNA processing factors
     KGM_205460B
SSDB
Motif
Pfam: SYMPK_PTA1_N Symplekin_C HEAT_GCN1_2 bHLH_SAC51 INTS1_R4
Other DBs
NCBI-ProteinID: OWR49608
UniProt: A0A212F7B0
LinkDB
Position
Unknown
AA seq 1007 aa
LQLLVIDTVIAVQKRAIQAASLVYRNVLLWICKGTSEMKDMQYVWEHLSELKLLILNMID
SDNEGIRTHSIKFLEEVVVLQSPHANDDDDFSLDCLPSHLPFLNRKAMEEESDHIFQLLL
KFHNSQHISSVNLMACMTTLCIVAKLRPKYMSSVVKALNDLHTTLPPTLSQSQVNSVRKH
LKMQLLILVKHPSSYDMMPQLTQLLMDIGMTPQEINKALPRDRRNKRLGELRASENPAKR
FRVDSPQSTLGSDSNSNSRSEFNLFDDDNSQQGSQQSITKASCTEESILDGLNSLENVVN
LVVTTLINNLPTEMPTSFILAYKPIPNSGSKVQKQSLAKMMMALIKDEPLPMPTTMKSLD
TTTKIPLLRDDDDKINLKNAVAKLQESTKVDKQIENAVSKLMEETRQEHLKEEERKNKDK
EKPVAPPTPSIPKLKQKVKLLKLQELTRPIPKEIKEKLMIQAVERILRAEKESVIGGAAQ
IRTKFITIFASSYTPEIRELVLNYILEDPLNRIDLALSWLYEEYAYMQGFNRHPVTLQPK
LHEKHGENYNQLLCALITQISERGDPVMEGSKDVLLRKVYSEAPVVTDEAVDYLKHLVTE
EKSATVALELLEELCLLRPPRAHKFVAALVCHVLSENEEIRNIALKSSTKIYKHSTDAAK
KVIEKHAMLYLGFISLSTPPQELYGNRHASRPWSDDLYKMCLNLVMALFPEKEDVIIEIA
RVYGTTGAEAKRCVLRQLEVPVRALAASEPPGHLSPALAALLDACPRGAETLLTRIVHVL
TDKYPPSPELVSRVRELYATRVSDVRFLIPVLNGLTKKEILAALPKLIKLNPIVVKEVFN
KLLGLQNPNEEQLPVSPEELLVALHLIDPSKADLKYIIKATALCFAEKNTYTQEVLSSVL
QRLAEEQQTPVLMMRSVLQALTLHPSLAPLALNILCLLCEREVWNNKVAWEGWVKCAERL
GPRAGPALRSLPPRARDMLPSHLTASCPSDAPYSGPNPIEPLPPGME
NT seq 3024 nt   +upstreamnt  +downstreamnt
ctgcaattactggtgatagatacggttattgcggtacagaagagggccattcaggcggcg
agcctggtttacagaaatgtcctcctttggatatgtaaaggaacctcggaaatgaaagac
atgcaatatgtttgggaacatttatccgaattaaagcttcttattctcaatatgatagat
agtgacaatgaaggtataaggacacattcaatcaagttcttggaggaagttgttgtactt
caaagtcctcatgcaaatgatgacgatgactttagtttggactgtttaccgtcacacctg
ccattcctcaacagaaaggccatggaagaagagtccgaccatattttccaattactgtta
aaattccacaactcgcaacatatatcaagcgttaacctcatggcttgtatgacaacgtta
tgcatagtggcgaaacttagaccaaaatatatgtcgagtgtggtgaaagctttaaacgac
ctgcacacgacactaccacctacattatcacagtcacaggtgaattcagtgcggaaacac
ctcaagatgcagctactgatattggtcaaacatccatcctcatatgacatgatgccgcaa
ttgacgcagttgctcatggacattggaatgaccccacaagaaataaataaagctctacct
agagacagaaggaacaaacgattgggagagttgagggcgtcagaaaatccagcaaaaaga
ttcagggttgactcgcctcagagcaccttgggcagcgatagcaacagtaacagcagaagt
gaattcaatttgtttgatgatgacaacagccagcagggcagccaacagagtataaccaaa
gcatcctgtacagaagaatcaattttagatggtctgaatagtttagaaaatgtcgtcaat
ctggttgtgacaaccctgattaataacctgccgactgaaatgcccactagtttcatcttg
gcttataaacctattccaaattcgggaagcaaggtccagaagcaaagtcttgctaaaatg
atgatggcattgatcaaagacgaaccattgccaatgcctaccaccatgaagtctttggat
accaccacaaaaatcccattactgagagacgacgacgataaaatcaatctaaagaacgcg
gtcgcaaaactacaggagtccaccaaagtagacaagcaaatagaaaatgctgtatcgaaa
ctgatggaagaaactagacaggagcatctcaaagaagaggagagaaagaataaggataaa
gaaaaaccagtcgctccaccaacgccatctataccgaaattaaaacagaaagtgaaacta
ttaaaactccaagaactaactcgacccataccaaaggaaattaaagagaaactgatgatt
caagccgtggaaagaatattgcgagccgagaaagagagcgttatcgggggagcggctcaa
ataaggacgaaattcatcacgatattcgcgtcaagttacactccggagatacgagaactg
gtcctcaactacatactggaagatccgttaaacagaatcgacctggcattatcctggctg
tacgaagaatacgcgtacatgcaaggcttcaaccggcatccggtgacgctgcagcccaaa
ctgcacgaaaaacacggcgaaaactacaaccagctgctatgcgctctgatcacgcagata
tcagagaggggggatccggtgatggaagggagtaaggacgtcctgctgaggaaggtttac
tccgaagcgcccgtagtcaccgacgaggcggtggactacttgaagcatctggtcactgag
gaaaagtcagcgacggtagccctggaactgctcgaggagttgtgtctgctaagaccacct
agggcgcacaaatttgttgccgccctagtatgtcacgtgttgagtgaaaacgaggaaatt
cgcaatatagccttgaaatcgtcaaccaaaatctacaaacacagtacggacgccgctaag
aaggttatagagaaacacgctatgttgtacctcggctttatctcgctgtcaacgccgccc
caagagttgtatggcaacagacacgcgagcagaccctggtccgacgacttgtataaaatg
tgcctcaatctggtcatggcgttgttcccagagaaggaagacgtgatcattgagatcgcc
cgcgtctacggaaccacaggcgctgaggcgaagcgctgtgtgctgcgacagctggaagtg
cctgtccgtgctctggccgcctcagagcctcctggacacctgtctcctgcgctcgcagca
ctgctggatgcgtgcccgcgcggcgccgagacgctactgacgcggatcgtgcacgtgctc
actgataaatatccgccgagccccgaactggtgtctcgtgtccgcgagctgtacgcgacc
cgagtctcagatgtgcggttccttataccggtgctgaatggacttaccaagaaggagatt
ctggctgccctgccgaagttgatcaaattaaatccaatagtagtgaaggaagttttcaac
aaattactcggcctgcagaatcccaacgaagaacaattaccggtctctcccgaagaacta
ctggtagctttgcatcttatagacccgagcaaagcagatctcaagtacatcatcaaagcg
accgctttatgtttcgctgaaaagaacacttacacacaggaggtgttgtcttcagttctc
cagcgcctggctgaggagcagcagacgccagtactgatgatgcgctctgttctgcaagcg
ttgacccttcacccatcactagcgccgctcgccctcaacatactatgcctcctgtgcgag
agagaggtttggaacaacaaagtggcttgggagggttgggtgaagtgcgctgaacgactt
ggacctcgagcgggtcccgcgctaaggtcactaccaccgagggcgagagacatgctacca
tcgcaccttacagcctcgtgtccgtcggatgctccttattctggcccaaacccgatagag
ccgttaccccccggaatggaatga

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