Danaus plexippus (monarch butterfly): KGM_205460B
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Entry
KGM_205460B CDS
T04344
Name
(GenBank) Symplekin
KO
K06100
symplekin
Organism
dpl
Danaus plexippus (monarch butterfly)
Pathway
dpl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dpl00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
KGM_205460B
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dpl03021
]
KGM_205460B
03019 Messenger RNA biogenesis [BR:
dpl03019
]
KGM_205460B
Transcription machinery [BR:
dpl03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
KGM_205460B
Messenger RNA biogenesis [BR:
dpl03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
KGM_205460B
U7-dependent histone pre-mRNA processing factors
KGM_205460B
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SYMPK_PTA1_N
Symplekin_C
HEAT_GCN1_2
bHLH_SAC51
INTS1_R4
Motif
Other DBs
NCBI-ProteinID:
OWR49608
UniProt:
A0A212F7B0
LinkDB
All DBs
Position
Unknown
AA seq
1007 aa
AA seq
DB search
LQLLVIDTVIAVQKRAIQAASLVYRNVLLWICKGTSEMKDMQYVWEHLSELKLLILNMID
SDNEGIRTHSIKFLEEVVVLQSPHANDDDDFSLDCLPSHLPFLNRKAMEEESDHIFQLLL
KFHNSQHISSVNLMACMTTLCIVAKLRPKYMSSVVKALNDLHTTLPPTLSQSQVNSVRKH
LKMQLLILVKHPSSYDMMPQLTQLLMDIGMTPQEINKALPRDRRNKRLGELRASENPAKR
FRVDSPQSTLGSDSNSNSRSEFNLFDDDNSQQGSQQSITKASCTEESILDGLNSLENVVN
LVVTTLINNLPTEMPTSFILAYKPIPNSGSKVQKQSLAKMMMALIKDEPLPMPTTMKSLD
TTTKIPLLRDDDDKINLKNAVAKLQESTKVDKQIENAVSKLMEETRQEHLKEEERKNKDK
EKPVAPPTPSIPKLKQKVKLLKLQELTRPIPKEIKEKLMIQAVERILRAEKESVIGGAAQ
IRTKFITIFASSYTPEIRELVLNYILEDPLNRIDLALSWLYEEYAYMQGFNRHPVTLQPK
LHEKHGENYNQLLCALITQISERGDPVMEGSKDVLLRKVYSEAPVVTDEAVDYLKHLVTE
EKSATVALELLEELCLLRPPRAHKFVAALVCHVLSENEEIRNIALKSSTKIYKHSTDAAK
KVIEKHAMLYLGFISLSTPPQELYGNRHASRPWSDDLYKMCLNLVMALFPEKEDVIIEIA
RVYGTTGAEAKRCVLRQLEVPVRALAASEPPGHLSPALAALLDACPRGAETLLTRIVHVL
TDKYPPSPELVSRVRELYATRVSDVRFLIPVLNGLTKKEILAALPKLIKLNPIVVKEVFN
KLLGLQNPNEEQLPVSPEELLVALHLIDPSKADLKYIIKATALCFAEKNTYTQEVLSSVL
QRLAEEQQTPVLMMRSVLQALTLHPSLAPLALNILCLLCEREVWNNKVAWEGWVKCAERL
GPRAGPALRSLPPRARDMLPSHLTASCPSDAPYSGPNPIEPLPPGME
NT seq
3024 nt
NT seq
+upstream
nt +downstream
nt
ctgcaattactggtgatagatacggttattgcggtacagaagagggccattcaggcggcg
agcctggtttacagaaatgtcctcctttggatatgtaaaggaacctcggaaatgaaagac
atgcaatatgtttgggaacatttatccgaattaaagcttcttattctcaatatgatagat
agtgacaatgaaggtataaggacacattcaatcaagttcttggaggaagttgttgtactt
caaagtcctcatgcaaatgatgacgatgactttagtttggactgtttaccgtcacacctg
ccattcctcaacagaaaggccatggaagaagagtccgaccatattttccaattactgtta
aaattccacaactcgcaacatatatcaagcgttaacctcatggcttgtatgacaacgtta
tgcatagtggcgaaacttagaccaaaatatatgtcgagtgtggtgaaagctttaaacgac
ctgcacacgacactaccacctacattatcacagtcacaggtgaattcagtgcggaaacac
ctcaagatgcagctactgatattggtcaaacatccatcctcatatgacatgatgccgcaa
ttgacgcagttgctcatggacattggaatgaccccacaagaaataaataaagctctacct
agagacagaaggaacaaacgattgggagagttgagggcgtcagaaaatccagcaaaaaga
ttcagggttgactcgcctcagagcaccttgggcagcgatagcaacagtaacagcagaagt
gaattcaatttgtttgatgatgacaacagccagcagggcagccaacagagtataaccaaa
gcatcctgtacagaagaatcaattttagatggtctgaatagtttagaaaatgtcgtcaat
ctggttgtgacaaccctgattaataacctgccgactgaaatgcccactagtttcatcttg
gcttataaacctattccaaattcgggaagcaaggtccagaagcaaagtcttgctaaaatg
atgatggcattgatcaaagacgaaccattgccaatgcctaccaccatgaagtctttggat
accaccacaaaaatcccattactgagagacgacgacgataaaatcaatctaaagaacgcg
gtcgcaaaactacaggagtccaccaaagtagacaagcaaatagaaaatgctgtatcgaaa
ctgatggaagaaactagacaggagcatctcaaagaagaggagagaaagaataaggataaa
gaaaaaccagtcgctccaccaacgccatctataccgaaattaaaacagaaagtgaaacta
ttaaaactccaagaactaactcgacccataccaaaggaaattaaagagaaactgatgatt
caagccgtggaaagaatattgcgagccgagaaagagagcgttatcgggggagcggctcaa
ataaggacgaaattcatcacgatattcgcgtcaagttacactccggagatacgagaactg
gtcctcaactacatactggaagatccgttaaacagaatcgacctggcattatcctggctg
tacgaagaatacgcgtacatgcaaggcttcaaccggcatccggtgacgctgcagcccaaa
ctgcacgaaaaacacggcgaaaactacaaccagctgctatgcgctctgatcacgcagata
tcagagaggggggatccggtgatggaagggagtaaggacgtcctgctgaggaaggtttac
tccgaagcgcccgtagtcaccgacgaggcggtggactacttgaagcatctggtcactgag
gaaaagtcagcgacggtagccctggaactgctcgaggagttgtgtctgctaagaccacct
agggcgcacaaatttgttgccgccctagtatgtcacgtgttgagtgaaaacgaggaaatt
cgcaatatagccttgaaatcgtcaaccaaaatctacaaacacagtacggacgccgctaag
aaggttatagagaaacacgctatgttgtacctcggctttatctcgctgtcaacgccgccc
caagagttgtatggcaacagacacgcgagcagaccctggtccgacgacttgtataaaatg
tgcctcaatctggtcatggcgttgttcccagagaaggaagacgtgatcattgagatcgcc
cgcgtctacggaaccacaggcgctgaggcgaagcgctgtgtgctgcgacagctggaagtg
cctgtccgtgctctggccgcctcagagcctcctggacacctgtctcctgcgctcgcagca
ctgctggatgcgtgcccgcgcggcgccgagacgctactgacgcggatcgtgcacgtgctc
actgataaatatccgccgagccccgaactggtgtctcgtgtccgcgagctgtacgcgacc
cgagtctcagatgtgcggttccttataccggtgctgaatggacttaccaagaaggagatt
ctggctgccctgccgaagttgatcaaattaaatccaatagtagtgaaggaagttttcaac
aaattactcggcctgcagaatcccaacgaagaacaattaccggtctctcccgaagaacta
ctggtagctttgcatcttatagacccgagcaaagcagatctcaagtacatcatcaaagcg
accgctttatgtttcgctgaaaagaacacttacacacaggaggtgttgtcttcagttctc
cagcgcctggctgaggagcagcagacgccagtactgatgatgcgctctgttctgcaagcg
ttgacccttcacccatcactagcgccgctcgccctcaacatactatgcctcctgtgcgag
agagaggtttggaacaacaaagtggcttgggagggttgggtgaagtgcgctgaacgactt
ggacctcgagcgggtcccgcgctaaggtcactaccaccgagggcgagagacatgctacca
tcgcaccttacagcctcgtgtccgtcggatgctccttattctggcccaaacccgatagag
ccgttaccccccggaatggaatga
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