KEGG   Danaus plexippus (monarch butterfly): KGM_206445
Entry
KGM_206445        CDS       T04344                                 
Name
(GenBank) RAD50 protein
  KO
K10866  DNA repair protein RAD50 [EC:3.6.-.-]
Organism
dpl  Danaus plexippus (monarch butterfly)
Pathway
dpl03440  Homologous recombination
dpl03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:dpl00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    KGM_206445
   03450 Non-homologous end-joining
    KGM_206445
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:dpl03032]
    KGM_206445
   03400 DNA repair and recombination proteins [BR:dpl03400]
    KGM_206445
DNA replication proteins [BR:dpl03032]
 Eukaryotic type
  DNA Replication Termination Factors
   MRN complex
    KGM_206445
DNA repair and recombination proteins [BR:dpl03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    MRN(MRX) complex
     KGM_206445
    BRCA1-C complex
     KGM_206445
   NHEJ (non-homologous end-joining)
    MRX complex
     KGM_206445
SSDB
Motif
Pfam: AAA_23 Rad50_zn_hook AAA_15 AAA_21 SbcC_Walker_B AAA_29 ABC_tran AAA_16
Other DBs
NCBI-ProteinID: OWR41199
UniProt: A0A212EI90
LinkDB
Position
Unknown
AA seq 1257 aa
MAGIKSLAVRGIRSFGPEECDEQRITFEKPLTLILGQNGCGKTTIIECLRYAITGQMPPG
SRYECFVHDTKVNRSVEVMAQVKLKIVNAKDKLLEVSRSMKVTAVKNKKPKFQTLDSFLS
VDDGSGKTKDISSRCADLDFVMHEELGVSKAILNSVIFCHQEDSSWPLDEGKKVKERFDE
IFDADKYSDCFDRLRKIRKEYEHEIKSLGQQVSYWTEKKEDLDKKKLDLVNTKTRMSEAE
EKILELSTELRPISEKLNAIETLQKNLVSFESAREKIKNRLEHQQDSVKELMKSIDKLYE
GTTEELHERYTNYGATIEAKHTELDKSYKQNFSFNKEEERIANEKTNNEVKFNKLILLES
QNQEKIDRRNNMVLDTAKLADVEVQKIETDGEADQCKAAVMEKIKDLMRKLEQHKLDADK
AEKEYQKHVDDSRDALSRHKQKISNKETEIQTVKKEIMKMGQQITDANKSKQRLEKLDAK
LKTAEDTILKEKDMIEESLKQKEKQLNVLKNKHRSAITELLGKMIENNFAISINQFECQT
RTELETIKKNISEKQNEITRVETDRDHINRQLRERREELSAAEDRMYRECGAQTYDNTLA
KITATVDKLQDEQNVLQSSMFIITKYKGQIKDNNCCPLCSRGFDNEDEVNDLISQLTTQV
MNVPAKLEKVTEELQRTSAKKDNLLSMRSLNERIVVLKEKDIPDLEKRLVEADKVIASLT
ESVDDLTMLSKEPEQKMSTLRQIQGDMPLLDKFTNEIRSSKKDLESVKAKCADFECDISL
DTATVKQTDLRQKIGILKTKIKSNQTKLNEHTKKIQKQAEEKNKLKEELLNIQKMVQELY
NLQETLKQMESNKEKYSTELKELENSTEKLEMELKEKEKAKNNAVTKNRHEIQEASTYLT
RVSNAFDKIKAIDSEIKQHKDRNIQKEMDQIKEANDRLNCRHKQIINDRDTLTKKIDSLK
DEIAKQEIYKRTLEDNIKLRKAETEIESCNKELLEINDKLKGVNTDMISEKEPLIMKQTK
IFREKAQTEGQLEELKKVYKQNQLELKKAQNQEVEKKYKEKLYELHVTKAIDADIRDYSI
ALDKCLMEFHKEKMENINLIIRELWRKIYRGNDIDYIEIKTEGSMSAESERRKYDYRVVQ
CKNGVEIDMRGRCSAGQKVLACLIIRLALAETFSSRFGILALDEPTTNLDQENVVSLCSA
LGDIVQERMSQRNFMFIIITHDREFIDTLGNIDKVTHYYEVSRNEEGKSRVKKIRFT
NT seq 3774 nt   +upstreamnt  +downstreamnt
atggcgggaatcaaatcattagcagtcagagggattcgaagttttggacctgaagaatgt
gatgaacagcgtattacatttgagaagcccttaacattaattttgggtcaaaatggttgt
ggtaaaacaacaattattgaatgtttgcgatatgctatcacagggcaaatgcctcccggt
agtcgctatgagtgtttcgttcatgatacaaaggtgaatagatcagtagaagtcatggct
caagtaaaattaaagattgtaaatgcaaaggataaattattggaggtttcaaggtctatg
aaggttacagcggttaaaaacaaaaagcctaaatttcagaccttagattcatttctttca
gtggatgatggaagtggaaaaacaaaggacatttcatctagatgtgcagacttagacttt
gttatgcatgaggaactaggtgtatcaaaagccatattaaattctgtaatattctgccat
caagaggactctagttggccattggatgaagggaagaaggtgaaagaaagatttgatgaa
atctttgatgctgataagtacagtgattgttttgatcgcctccgaaagattcggaaggag
tacgagcatgaaattaaatctcttggtcagcaagtttcatattggactgagaaaaaagaa
gatcttgataagaaaaaattagatctggttaacactaaaactagaatgtctgaagctgaa
gagaaaattttggaactcagcactgaattgagaccaatatcagagaaactcaacgccatt
gaaaccttgcaaaaaaacctagtatcatttgaatcggccagagagaaaattaaaaataga
ttagaacaccaacaagattctgtgaaggaattgatgaaatccattgataaattgtatgaa
ggtacaactgaagaactgcatgaaagatacacaaactatggtgccaccatagaggcgaaa
cacacagaacttgataaatcatacaaacaaaacttttcgttcaataaagaggaggagcgt
attgcaaatgaaaagactaacaatgaagttaaattcaataaattgattcttttggagagt
caaaaccaagaaaagatcgatagaaggaacaatatggtattggatacagccaagcttgct
gatgtggaagtccaaaaaatagaaacagatggtgaagctgatcagtgtaaagctgctgtg
atggaaaaaatcaaagatttaatgagaaaattggaacaacacaagttagatgccgacaag
gcagagaaagaatatcaaaaacatgtcgatgacagtagagatgcactttcccgccacaaa
caaaaaatatcaaacaaagaaacagaaatacaaacagtgaagaaagaaataatgaagatg
gggcagcaaataaccgacgctaataaatctaaacagagattagaaaaattggacgcaaaa
ttaaaaaccgctgaggatacaatattgaaagaaaaggatatgatcgaggaatctttgaaa
cagaaagagaagcaacttaatgtactgaagaacaaacatcgctctgccatcaccgagctg
ttggggaaaatgattgaaaacaattttgcaatatctatcaatcagtttgaatgtcaaacg
aggaccgagctggaaaccattaagaagaatatatccgagaaacaaaatgagataactcgt
gtggagacggatcgcgatcacatcaatcggcagctccgcgaacgacgcgaggaactttcc
gccgctgaagaccggatgtatcgcgagtgtggagcgcagacttacgacaacacactcgct
aagatcacagccaccgtagacaagctacaggatgaacaaaacgtactgcagtcctcaatg
ttcattataacgaaatacaaaggtcaaataaaggacaataactgctgccccttatgcagc
cgcggctttgataatgaagatgaggtgaatgacctcatatcccaactaacaactcaagtg
atgaacgtgccggctaaactagagaaggtaacagaggagttgcagaggacttccgctaag
aaagataacttgctaagtatgaggtctttgaatgagaggattgtggtcttgaaggaaaaa
gatattccggacttggagaaacgattagttgaggcggataaggtgatagctagtttaaca
gaatcagttgatgacttgacaatgctctcgaaggagccagaacagaaaatgtcaactttg
cgtcagatacagggagatatgccactgttggataaatttaccaacgaaattagaagtagt
aagaaagacctcgaatctgtaaaagcaaaatgtgccgattttgagtgcgatatttctttg
gacaccgctaccgtgaaacaaactgatttgagacagaagatcgggattttgaagaccaag
atcaaaagtaaccaaacgaaattaaacgaacacaccaagaagatacaaaagcaagcagaa
gagaagaataaacttaaagaagaacttcttaatatacagaaaatggttcaagaattgtac
aatttacaagagaccctaaagcaaatggaatctaataaagaaaaatattcgacggaatta
aaagaactggaaaattcaacagaaaaactggaaatggaactgaaagagaaagaaaaggct
aaaaataatgccgtaacgaaaaataggcatgagattcaagaagcgagtacatatttaaca
agagtaagcaacgcctttgataagataaaagcaatagactctgagatcaagcaacacaaa
gataggaacatccaaaaagaaatggatcagataaaagaagccaacgacaggctgaactgt
cgccacaaacagatcattaatgacagagacacactcactaagaaaattgacagtttgaaa
gatgaaattgcgaaacaggagatatacaaacgtacattagaagacaatataaagctacga
aaagcggaaacggaaatagaatcctgtaataaagagctccttgaaataaacgataagtta
aaaggtgtgaacacagacatgatctcagaaaaggaaccgctgattatgaaacaaactaag
atatttagagagaaagcgcaaacagagggacaattggaagaattgaagaaagtttacaaa
caaaatcaattggaacttaaaaaagctcaaaatcaagaggttgaaaagaaatacaaagag
aaactctatgaattacacgttacgaaagctatagatgcagatattcgagattattctata
gccttggataaatgccttatggagttccataaggagaaaatggaaaatatcaatctcatt
ataagagaactttggaggaaaatatacagaggcaatgatatagactatatagagataaag
acagagggaagtatgtcagcagaatctgaacgccgaaaatatgattacagagttgttcaa
tgtaagaacggcgtggagattgatatgcgtggaagatgcagtgctggtcagaaagtattg
gcatgtcttattataagacttgcgctggcagaaacgtttagttcaaggtttggtatacta
gctttagatgaacctacaacgaatttagaccaggaaaatgtagtaagtctgtgttctgcc
ctcggtgatatagtacaagaaaggatgtcgcagagaaatttcatgttcattatcataact
catgacagagaatttattgataccttgggcaatattgataaggtaactcactactatgaa
gtgtccagaaatgaagaaggtaaatcaagagttaagaagattagattcacatag

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