Danaus plexippus (monarch butterfly): KGM_206445
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Entry
KGM_206445 CDS
T04344
Name
(GenBank) RAD50 protein
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
dpl
Danaus plexippus (monarch butterfly)
Pathway
dpl03440
Homologous recombination
dpl03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
dpl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
KGM_206445
03450 Non-homologous end-joining
KGM_206445
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dpl03032
]
KGM_206445
03400 DNA repair and recombination proteins [BR:
dpl03400
]
KGM_206445
DNA replication proteins [BR:
dpl03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
KGM_206445
DNA repair and recombination proteins [BR:
dpl03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
KGM_206445
BRCA1-C complex
KGM_206445
NHEJ (non-homologous end-joining)
MRX complex
KGM_206445
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_23
Rad50_zn_hook
AAA_15
AAA_21
SbcC_Walker_B
AAA_29
ABC_tran
AAA_16
Motif
Other DBs
NCBI-ProteinID:
OWR41199
UniProt:
A0A212EI90
LinkDB
All DBs
Position
Unknown
AA seq
1257 aa
AA seq
DB search
MAGIKSLAVRGIRSFGPEECDEQRITFEKPLTLILGQNGCGKTTIIECLRYAITGQMPPG
SRYECFVHDTKVNRSVEVMAQVKLKIVNAKDKLLEVSRSMKVTAVKNKKPKFQTLDSFLS
VDDGSGKTKDISSRCADLDFVMHEELGVSKAILNSVIFCHQEDSSWPLDEGKKVKERFDE
IFDADKYSDCFDRLRKIRKEYEHEIKSLGQQVSYWTEKKEDLDKKKLDLVNTKTRMSEAE
EKILELSTELRPISEKLNAIETLQKNLVSFESAREKIKNRLEHQQDSVKELMKSIDKLYE
GTTEELHERYTNYGATIEAKHTELDKSYKQNFSFNKEEERIANEKTNNEVKFNKLILLES
QNQEKIDRRNNMVLDTAKLADVEVQKIETDGEADQCKAAVMEKIKDLMRKLEQHKLDADK
AEKEYQKHVDDSRDALSRHKQKISNKETEIQTVKKEIMKMGQQITDANKSKQRLEKLDAK
LKTAEDTILKEKDMIEESLKQKEKQLNVLKNKHRSAITELLGKMIENNFAISINQFECQT
RTELETIKKNISEKQNEITRVETDRDHINRQLRERREELSAAEDRMYRECGAQTYDNTLA
KITATVDKLQDEQNVLQSSMFIITKYKGQIKDNNCCPLCSRGFDNEDEVNDLISQLTTQV
MNVPAKLEKVTEELQRTSAKKDNLLSMRSLNERIVVLKEKDIPDLEKRLVEADKVIASLT
ESVDDLTMLSKEPEQKMSTLRQIQGDMPLLDKFTNEIRSSKKDLESVKAKCADFECDISL
DTATVKQTDLRQKIGILKTKIKSNQTKLNEHTKKIQKQAEEKNKLKEELLNIQKMVQELY
NLQETLKQMESNKEKYSTELKELENSTEKLEMELKEKEKAKNNAVTKNRHEIQEASTYLT
RVSNAFDKIKAIDSEIKQHKDRNIQKEMDQIKEANDRLNCRHKQIINDRDTLTKKIDSLK
DEIAKQEIYKRTLEDNIKLRKAETEIESCNKELLEINDKLKGVNTDMISEKEPLIMKQTK
IFREKAQTEGQLEELKKVYKQNQLELKKAQNQEVEKKYKEKLYELHVTKAIDADIRDYSI
ALDKCLMEFHKEKMENINLIIRELWRKIYRGNDIDYIEIKTEGSMSAESERRKYDYRVVQ
CKNGVEIDMRGRCSAGQKVLACLIIRLALAETFSSRFGILALDEPTTNLDQENVVSLCSA
LGDIVQERMSQRNFMFIIITHDREFIDTLGNIDKVTHYYEVSRNEEGKSRVKKIRFT
NT seq
3774 nt
NT seq
+upstream
nt +downstream
nt
atggcgggaatcaaatcattagcagtcagagggattcgaagttttggacctgaagaatgt
gatgaacagcgtattacatttgagaagcccttaacattaattttgggtcaaaatggttgt
ggtaaaacaacaattattgaatgtttgcgatatgctatcacagggcaaatgcctcccggt
agtcgctatgagtgtttcgttcatgatacaaaggtgaatagatcagtagaagtcatggct
caagtaaaattaaagattgtaaatgcaaaggataaattattggaggtttcaaggtctatg
aaggttacagcggttaaaaacaaaaagcctaaatttcagaccttagattcatttctttca
gtggatgatggaagtggaaaaacaaaggacatttcatctagatgtgcagacttagacttt
gttatgcatgaggaactaggtgtatcaaaagccatattaaattctgtaatattctgccat
caagaggactctagttggccattggatgaagggaagaaggtgaaagaaagatttgatgaa
atctttgatgctgataagtacagtgattgttttgatcgcctccgaaagattcggaaggag
tacgagcatgaaattaaatctcttggtcagcaagtttcatattggactgagaaaaaagaa
gatcttgataagaaaaaattagatctggttaacactaaaactagaatgtctgaagctgaa
gagaaaattttggaactcagcactgaattgagaccaatatcagagaaactcaacgccatt
gaaaccttgcaaaaaaacctagtatcatttgaatcggccagagagaaaattaaaaataga
ttagaacaccaacaagattctgtgaaggaattgatgaaatccattgataaattgtatgaa
ggtacaactgaagaactgcatgaaagatacacaaactatggtgccaccatagaggcgaaa
cacacagaacttgataaatcatacaaacaaaacttttcgttcaataaagaggaggagcgt
attgcaaatgaaaagactaacaatgaagttaaattcaataaattgattcttttggagagt
caaaaccaagaaaagatcgatagaaggaacaatatggtattggatacagccaagcttgct
gatgtggaagtccaaaaaatagaaacagatggtgaagctgatcagtgtaaagctgctgtg
atggaaaaaatcaaagatttaatgagaaaattggaacaacacaagttagatgccgacaag
gcagagaaagaatatcaaaaacatgtcgatgacagtagagatgcactttcccgccacaaa
caaaaaatatcaaacaaagaaacagaaatacaaacagtgaagaaagaaataatgaagatg
gggcagcaaataaccgacgctaataaatctaaacagagattagaaaaattggacgcaaaa
ttaaaaaccgctgaggatacaatattgaaagaaaaggatatgatcgaggaatctttgaaa
cagaaagagaagcaacttaatgtactgaagaacaaacatcgctctgccatcaccgagctg
ttggggaaaatgattgaaaacaattttgcaatatctatcaatcagtttgaatgtcaaacg
aggaccgagctggaaaccattaagaagaatatatccgagaaacaaaatgagataactcgt
gtggagacggatcgcgatcacatcaatcggcagctccgcgaacgacgcgaggaactttcc
gccgctgaagaccggatgtatcgcgagtgtggagcgcagacttacgacaacacactcgct
aagatcacagccaccgtagacaagctacaggatgaacaaaacgtactgcagtcctcaatg
ttcattataacgaaatacaaaggtcaaataaaggacaataactgctgccccttatgcagc
cgcggctttgataatgaagatgaggtgaatgacctcatatcccaactaacaactcaagtg
atgaacgtgccggctaaactagagaaggtaacagaggagttgcagaggacttccgctaag
aaagataacttgctaagtatgaggtctttgaatgagaggattgtggtcttgaaggaaaaa
gatattccggacttggagaaacgattagttgaggcggataaggtgatagctagtttaaca
gaatcagttgatgacttgacaatgctctcgaaggagccagaacagaaaatgtcaactttg
cgtcagatacagggagatatgccactgttggataaatttaccaacgaaattagaagtagt
aagaaagacctcgaatctgtaaaagcaaaatgtgccgattttgagtgcgatatttctttg
gacaccgctaccgtgaaacaaactgatttgagacagaagatcgggattttgaagaccaag
atcaaaagtaaccaaacgaaattaaacgaacacaccaagaagatacaaaagcaagcagaa
gagaagaataaacttaaagaagaacttcttaatatacagaaaatggttcaagaattgtac
aatttacaagagaccctaaagcaaatggaatctaataaagaaaaatattcgacggaatta
aaagaactggaaaattcaacagaaaaactggaaatggaactgaaagagaaagaaaaggct
aaaaataatgccgtaacgaaaaataggcatgagattcaagaagcgagtacatatttaaca
agagtaagcaacgcctttgataagataaaagcaatagactctgagatcaagcaacacaaa
gataggaacatccaaaaagaaatggatcagataaaagaagccaacgacaggctgaactgt
cgccacaaacagatcattaatgacagagacacactcactaagaaaattgacagtttgaaa
gatgaaattgcgaaacaggagatatacaaacgtacattagaagacaatataaagctacga
aaagcggaaacggaaatagaatcctgtaataaagagctccttgaaataaacgataagtta
aaaggtgtgaacacagacatgatctcagaaaaggaaccgctgattatgaaacaaactaag
atatttagagagaaagcgcaaacagagggacaattggaagaattgaagaaagtttacaaa
caaaatcaattggaacttaaaaaagctcaaaatcaagaggttgaaaagaaatacaaagag
aaactctatgaattacacgttacgaaagctatagatgcagatattcgagattattctata
gccttggataaatgccttatggagttccataaggagaaaatggaaaatatcaatctcatt
ataagagaactttggaggaaaatatacagaggcaatgatatagactatatagagataaag
acagagggaagtatgtcagcagaatctgaacgccgaaaatatgattacagagttgttcaa
tgtaagaacggcgtggagattgatatgcgtggaagatgcagtgctggtcagaaagtattg
gcatgtcttattataagacttgcgctggcagaaacgtttagttcaaggtttggtatacta
gctttagatgaacctacaacgaatttagaccaggaaaatgtagtaagtctgtgttctgcc
ctcggtgatatagtacaagaaaggatgtcgcagagaaatttcatgttcattatcataact
catgacagagaatttattgataccttgggcaatattgataaggtaactcactactatgaa
gtgtccagaaatgaagaaggtaaatcaagagttaagaagattagattcacatag
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