Danaus plexippus (monarch butterfly): KGM_206827
Help
Entry
KGM_206827 CDS
T04344
Name
(GenBank) ATP-dependent RNA helicase DDX39A
KO
K12812
ATP-dependent RNA helicase UAP56/SUB2 [EC:
5.6.2.7
]
Organism
dpl
Danaus plexippus (monarch butterfly)
Pathway
dpl03013
Nucleocytoplasmic transport
dpl03015
mRNA surveillance pathway
dpl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dpl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
KGM_206827
09122 Translation
03013 Nucleocytoplasmic transport
KGM_206827
03015 mRNA surveillance pathway
KGM_206827
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dpl03019
]
KGM_206827
03041 Spliceosome [BR:
dpl03041
]
KGM_206827
Enzymes [BR:
dpl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
KGM_206827
Messenger RNA biogenesis [BR:
dpl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
KGM_206827
Spliceosome [BR:
dpl03041
]
Complex C
Other components
EJC/TREX
KGM_206827
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
KGM_206827
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
OWR54828
UniProt:
A0A212FM47
LinkDB
All DBs
Position
Unknown
AA seq
425 aa
AA seq
DB search
MADNDDLLDYEDEEQADQQNVDGATEAAPKKEVKGSYVSIHSSGFRDFLLKPEILRAIVD
CGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLEPSDNHVYVLVMCHT
RELAFQISKEYERFSKYMAGVRVSVFFGGMPIQKDEDVLKTACPHIVVGTPGRILALVNN
KKLNLKHLKHFILDECDKMLESLDMRRDVQEIFRNTPHGKQVMMFSATLSKDIRPVCKKF
MQDPMEVYVDDEAKLTLHGLQQHYVKLKENEKNKKLFELLDVLEFNQVVIFVKSVQRCIA
LAQLLTDQNFPAIGIHRNMTQDERLSRYQQFKDFQKRILVATNLFGRGMDIERVNIVFNY
DMPEDSDTYLHRVARAGRFGTKGLAITMVSDENDAKILNEVQDRFDVNITELPDEIELST
YIEGR
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atggctgataacgacgatcttctcgactatgaagatgaagagcaggcagatcaacagaac
gttgacggagcgaccgaagcggcgccaaaaaaggaggttaagggttcctacgtatcgatt
cacagctctggctttagggactttctccttaagcctgagattctacgagccatagtggac
tgtggtttcgaacatccatcagaagttcaacatgaatgtattcctcaagcggtactgggt
atggatatcttatgccaagctaagtccggtatgggcaaaaccgcggtgtttgtactagcc
acgttacagcaactagagccttcggataatcatgtttatgttcttgtcatgtgccacacc
cgagaattagcttttcaaatcagcaaagagtatgaacgcttttctaagtacatggccggc
gtccgtgtgtcagttttctttggcggcatgccgattcaaaaagatgaggatgttttaaaa
actgcatgccctcatatcgtcgttgggacaccaggacgtattttagccctcgttaacaat
aagaaattaaacttgaaacatctaaaacatttcatacttgatgaatgcgacaagatgttg
gaatctctggatatgagaagagatgtgcaagaaatattccgaaacactcctcatgggaaa
caagtgatgatgttttctgccactttgagtaaagatatcagacccgtatgtaagaaattc
atgcaggaccccatggaagtgtatgttgatgatgaagcaaaacttactctgcatggactt
cagcagcactatgtgaaacttaaagaaaatgagaagaataagaagttatttgaactctta
gatgtgttggaattcaaccaagtagttatatttgtaaaatcggttcaaagatgcatagct
ctagcacaacttttgacggaccaaaacttccctgccattggaattcatagaaacatgaca
caagacgagcgtctttcccgttaccaacagttcaaagatttccaaaagagaatattggta
gcaaccaatctgtttggaagagggatggatattgaaagagttaatatagtatttaattat
gacatgcctgaagactctgatacctacctccatagagtggcccgagcaggaagattcggt
accaaaggtctagccataacaatggtatcggatgaaaatgatgcaaaaatcctgaacgaa
gtccaggaccgttttgatgtcaacataacagagctacctgatgagattgagctatccact
tacatagagggacgataa
DBGET
integrated database retrieval system
