Danaus plexippus (monarch butterfly): KGM_207257
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Entry
KGM_207257 CDS
T04344
Name
(GenBank) Splicing factor 3B subunit 3
KO
K12830
splicing factor 3B subunit 3
Organism
dpl
Danaus plexippus (monarch butterfly)
Pathway
dpl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dpl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
KGM_207257
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dpl03021
]
KGM_207257
03041 Spliceosome [BR:
dpl03041
]
KGM_207257
03036 Chromosome and associated proteins [BR:
dpl03036
]
KGM_207257
Transcription machinery [BR:
dpl03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
KGM_207257
Spliceosome [BR:
dpl03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
KGM_207257
Complex B
KGM_207257
Complex C
U2 SnRNP specific factors
KGM_207257
Chromosome and associated proteins [BR:
dpl03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
KGM_207257
TFTC complex
KGM_207257
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
CPSF_A
Beta-prop_BBS7
Tubulin
GtgE
Motif
Other DBs
NCBI-ProteinID:
OWR42297
UniProt:
A0A212ELF1
LinkDB
All DBs
Position
Unknown
AA seq
1216 aa
AA seq
DB search
MYLYNLTLQGSTAISHAVHGNFSGTKQQEIIISRGKTLELLRPDPNTGKVHTLMKVEIFG
VIRSMMSFRLTGGTKDYIVVGSDSGRIVILEYIPAKNILEKVHQETFGKSGCRRIVPGQY
LAIDPKGRAVMIGAIEKQKLVYILNRDAEARLTISSPLEAHKSNTLVYHMVGVDVGFENP
MFACLEIDYEEADSDPTGEAAQKTQQTLTFYELDLGLNHVVRKYSEPLEEHANFLITVPG
GNDGPSGVLICSENYLTYKNLGDQHDIRCPIPRRRNDLDDPERGMIFVCSATHKTKSMFF
FLAQTEQGDIFKITIETDEDMVTEIKLKYFDTVPVATAMCVLKTGFLFVACEFGNHYLYQ
IAHLGDEDDEPEFSSAMPLEEGDTFFFAPRPLRNLVLVDELDSLSPILACHVADLTGEDT
PQVYLACGRGPRSSLRALRHGLEVAEMAVSELPGSPNAVWTVRRHKDDDYDSYIIVSFVN
ATLVLSIGETVEEVTDSGFLGTTPTLSCHALGSDALVQVYPDGIRHIRADKRVNEWKAPG
KKSIVKCAVNQRQVVIALTGGELVYFEMDPTGQLNEYTERKKLSSDVSCMALGSVATGEQ
RAWFLAVGLVDNTVRIISLDPADCLAPRSMQALPASPESLCIVDQPFESGAKSALHLNIG
LSNGVLLRTTLDSVSGDLADTRTRYLGSRPVKLFKVRVQSAEAVLAVSSRTWLGYQYQNR
FHLTPLSYECLEYAAGFSSEQCTEGIVAISSNTLRILALEKLGAVFNQTFQQLDYTPRKF
VINSDNNHIIVLETDHNAYTEEMKKQRRVQMAQEMREAAAGGTPEEQQLANEMADAFLSD
VLPENIFSSPKAGAGMWASQIRILDMSGGVGGCSTVCLLPLEQNEAAVSLCVVRWAALTD
NTPHLVVGVAKDALLSPRSCSEGSLHVYKIYNTGKLELVHKTPIDEYPGALAAFNGKLLA
GVGRMLRLYDIGRRKLLRKCENRHIPNLIADIKTIRQRIFVSDVQESVFCVKYKKRENQL
IIFADDTNPRWITNTCILDYDTVAMADKFGNVAVLRLPQSVSDDVDEDPTGNKALWDRGL
LNGASQKGDITVNFHVGETVTSLQRATLIPGGSEALLYATVSGALGVFLPFTSREDHDFF
QHLEMHMRSENSPLCGRDHLSFRSYYYPVKNVIDGDLCEQFNSLEPAKQKAIAGDLERTP
AEVSKKLEDIRTRYAF
NT seq
3651 nt
NT seq
+upstream
nt +downstream
nt
atgtatctttacaatttaacgctgcaaggctcaacggccatttcgcacgccgtgcatggg
aatttttctggcacgaaacagcaagaaataattatatctcgaggcaaaactttagaattg
ctaagacctgatccaaatactggaaaagtgcacactttaatgaaagtggagattttcggc
gtcattcgttctatgatgtcatttcgactcaccggcggcactaaagattatatagttgtt
ggatctgactcggggcgcattgttatacttgaatatatacctgctaagaacattctcgaa
aaagtacatcaagagacatttgggaaatcgggatgtagaagaatagtaccagggcagtac
ctagcaattgatccgaaaggcagagctgttatgataggtgcaattgaaaagcaaaaattg
gtatacattttgaacagagatgctgaagctagattaacaatctcgtcaccgcttgaagct
cacaaatctaacacattagtataccacatggtgggagttgatgttggctttgaaaacccc
atgtttgcttgcttggagatagactatgaagaggcagactctgatcccacaggggaagca
gctcaaaagacacagcagacattaacattttatgagctggatttgggtttaaatcatgta
gtaagaaaatattcagaacctcttgaagaacatgccaatttccttataacggtacctggt
ggtaatgatggcccgtcaggtgtacttatctgttcagaaaattatctaacctacaaaaat
ttgggagaccagcatgatattagatgtcctattcctagaaggagaaatgatttagacgac
ccagaaaggggtatgatctttgtctgctcggccacacacaagacaaaatcgatgttcttt
ttcctggcacaaactgaacagggtgatatatttaaaatcactatagaaaccgatgaagat
atggtgacggaaattaaactgaaatactttgatactgtaccagttgcaactgctatgtgc
gttctgaagactggctttctttttgttgcttgtgaatttggcaaccactatttataccaa
attgctcacttgggtgatgaagatgatgaaccagaattcagttctgcaatgccattagag
gaaggagacacatttttctttgctccccgacctctcaggaacttggtgctggttgatgaa
ttggattccctctcacccatactcgcttgccatgtggcagacttaactggtgaagataca
cctcaagtgtatttagcatgtggcagaggaccaagatcttcactgagagccttaagacat
ggtttagaagtagcagagatggctgtatcagaactacccggttcaccaaatgcagtatgg
actgtgcgacggcacaaagatgatgactatgattcgtacatcatagtgagtttcgtaaac
gctacgttggtgctatctatcggtgagactgtggaagaggtgacggactctggttttctc
ggaaccacaccgacattgagctgccacgcacttggaagtgatgcattggttcaagtatat
cctgatggtataagacatatcagggctgacaaacgagttaacgagtggaaggcacccggc
aagaagtctattgtgaaatgtgccgtcaatcaaagacaagttgtcatagcactgactgga
ggtgaactggtgtactttgaaatggacccgactggccaattgaatgagtacactgaacga
aagaagttgtcatctgatgtatcctgtatggcactgggatcagtagctactggagaacag
agagcttggttcctagctgttggtttagttgacaatactgtcagaattatttcactggat
cctgctgattgtctagcacctcgttcaatgcaagccctgcctgccagccccgagtccttg
tgtattgttgatcaaccctttgagtctggtgccaaatctgctttacaccttaacattggc
ttaagtaatggagtattactacgtacaactctggactctgttagtggtgatttagctgat
acaagaacaagatacctgggatctcgccctgtgaaacttttcaaagttagagtgcagtca
gcggaagcagtgctggctgtgtcttcgaggacatggctcggttatcaatatcagaacaga
ttccatctaacgccattgtcatatgaatgtctagagtatgctgcgggatttagctctgaa
caatgtaccgagggtatagtggccatttcatcaaatacactaagaattttagccctagaa
aaattgggtgccgtattcaatcaaacattccaacaattagattacacaccaagaaagttt
gttataaatagtgataacaatcacatcatagttttggagactgaccacaatgcttacact
gaagaaatgaagaagcaaagaagagtgcaaatggcacaagaaatgagagaagctgctgct
gggggaactcccgaggaacaacaactagcaaatgaaatggccgacgcgttcctttcagat
gtgttgccagaaaatatattttcttccccgaaagctggtgccggcatgtgggcgtctcag
atccgtatactggacatgagtggcggcgtgggcgggtgtagcactgtgtgtctactaccg
ctggaacagaacgaggcggccgtgtctttgtgtgtagtacgatgggccgctctcactgac
aacacaccacatctagtagtaggggttgccaaggacgctctgctgtcaccacgtagctgc
tctgagggcagtctacatgtttataagatttataatactggaaaattggaattggtacat
aaaacaccaatagatgaataccctggagcgttggcagcattcaatggcaagctgctggca
ggagtggggcggatgttgaggttgtacgacattggtagaaggaaactattacggaagtgc
gaaaacagacacattccaaacctcatagcggatatcaaaactataaggcagagaatattc
gtatcggacgtccaagaatccgtgttctgtgttaaatacaagaagagggaaaaccagctg
attattttcgccgacgacaccaatcccaggtggatcaccaacacttgtattctagactac
gacacggtcgctatggccgacaagtttggcaacgtagccgttttgagactgcctcagtct
gtgagcgacgatgtggatgaggatccgactggaaacaaagcgctctgggacagaggtctt
ctgaatggagcgtctcaaaagggtgacatcactgttaatttccacgttggagagactgtg
acgtctttgcaaagagctactctaatcccgggcggttcggaggcgctcttgtacgccaca
gtgagcggagcactgggagtgttcctaccgttcacctccagggaagatcacgacttcttc
cagcaccttgaaatgcacatgaggagtgaaaactcacctctgtgcggacgagaccacttg
tcattcagaagctactattatccagtaaagaatgtgatagacggcgacctctgcgaacag
ttcaactcgctggagccggcgaaacagaaagccatcgccggagacctggagcgaactccg
gccgaggtgtccaagaagctggaggacatcagaactagatacgccttttaa
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