Danaus plexippus (monarch butterfly): KGM_210363
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Entry
KGM_210363 CDS
T04344
Name
(GenBank) cleavage and polyadenylation specific factor 4
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
dpl
Danaus plexippus (monarch butterfly)
Pathway
dpl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dpl00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
KGM_210363
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dpl03021
]
KGM_210363
03019 Messenger RNA biogenesis [BR:
dpl03019
]
KGM_210363
Transcription machinery [BR:
dpl03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
KGM_210363
Messenger RNA biogenesis [BR:
dpl03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
KGM_210363
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribosomal_L7Ae
zf-CCCH
zf_CCCH_4
Torus
zf-CCCH_4
zf-CCHC
zf-CCCH_2
zf-CCCH_3
PELOTA_1
Motif
Other DBs
NCBI-ProteinID:
OWR41463
UniProt:
A0A212EIZ0
LinkDB
All DBs
Position
Unknown
AA seq
410 aa
AA seq
DB search
MEVIVANVDHIKFDIDYALEQQYGALPLPFPGMDKSTAAVCEFYSQPGGCGNGPQCPYRH
VRGDRTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYARFNACHNKECPFLHIDPES
KIKDCPWYDRGFCRHGPHCRHRHVRRVLCINYLAGFCPDGANCKYMHPRFELPAPPEQTK
DAKRLPVCHYCSEVGHKASTCHKIPPDQREVAQKQEEARYRALGYVKPAVDGEELRLQRL
IHKPLEEVTCFKCGTKGHYANKCPKGHLAFLSNQPPPGNPNAESEASVNPKAYPLADTAL
TAKILNLVQQAANYKQLRKGANEATKTLNRGLSEFVIMAADAEPLEIVLHIPILCEDKNV
PYVFVRSKQALGRACGVSRPIVACSITINEGSQLKPQIQSIQQEIERLLV
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atggaagttatagtggcaaacgtggatcatataaaatttgacatcgattatgctttagag
cagcagtatggagccctgcctttgccctttcctggaatggataaatctactgcagcagtc
tgcgaattctacagccaacccgggggatgtggtaatggacctcagtgcccttatcgtcat
gtgaggggagaccgaacagtagtatgtaagcattggctgagaggtctctgcaagaaaggc
gaccagtgtgaatttctacacgaatatgacatgaccaaaatgcctgagtgctatttttat
gctagattcaacgcttgccacaataaggagtgtccatttcttcatatagatccagaaagc
aaaattaaagattgtccatggtatgatcgtgggttttgtagacatggtccacattgtaga
catcgccatgtcagaagagttctctgtataaattacttggcaggcttctgccctgatggt
gcaaactgcaagtacatgcacccacggtttgaattaccagctcctccagaacagacaaag
gatgctaaaagacttcccgtctgccactactgttcagaagtaggacataaggcttccact
tgtcataagattcctcctgatcaaagagaagtcgcccaaaaacaggaggaggcacgttat
agagccttgggctatgtcaagcctgctgtagatggtgaagaactgagattacaaagactg
atccacaaacctttagaggaagtgacttgtttcaagtgcggtacaaagggacattatgcc
aacaagtgccccaaaggtcacctggccttcctatcaaatcaaccccctcccggcaaccca
aatgctgaatccgaagcgtctgttaatcccaaagcctatcctttagctgacacggctcta
acagctaaaattttaaacctcgtgcagcaagcggctaactacaaacagttgcgtaaaggt
gccaatgaagccaccaagaccttgaacagaggactgtccgagttcgtcattatggcggcg
gacgccgaaccactggaaatcgttctgcacattccaattctttgcgaagataagaatgtg
ccttatgtgtttgtcagatccaaacaagctttgggtcgagcctgtggagtgtcccggccg
atagtggcgtgttccatcactatcaatgagggatcacaactgaagccgcagatccaaagt
attcagcaagagatagagagactcttagtgtga
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